Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_2398 |
Symbol | |
ID | 3740436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 2709976 |
End bp | 2711082 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637779690 |
Product | queuine tRNA-ribosyltransferase |
Protein accession | YP_385348 |
Protein GI | 78223601 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming [TIGR00449] tRNA-guanine transglycosylases, various specificities |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000000000165402 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTTA CCCTCAATAA AAAGGACAGG AAGACCGCTG CCCGGCGGGG GACATTGGTA ACGCCGCACG GCACTATCGA AACTCCTATC TTCATGCCGG TGGGCACCCA CGCAGCCATG AAGGCAATGA CACCGGTACA GGTGAAGGAG ACCGGCGCCC AGATCATCCT CTCCAACACC TATCACCTTC ATCTCCGTCC TGGCGAGGAA CTGGTGGCGA AAGCCGGCGG ACTCCACAGC TTCATGGCCT GGGACGGACC TATCCTGACC GACTCCGGCG GGTTCCAGGT CTTCTCGCTC CCCAACAAGC GGATAACCGA GGAAGGCGCC TACTTCAAGC ATGAGGTTTC CGGCGAGGAG GTCTTTCTCG ACCCGGCCAG AGCCATCGCC ATCCAGGAAG ACCTGGGCGC CGACATAATC ATGGCTTTCG ACGAGTGCAT TCCCTACCCC TGCGACCGCA AGTACGCGGC TAAATCGACC CGAAAAACCC TCCGCTGGGC AGAGCAGTGC AAGAAAGCCC AGACACGGAA AGATCAGGCC CTGTTCGGCA TCGTACAGGG AAGCGTCTTC GAGGATCTGC GCGCCATGTG CGCCAAAGAA CTCGTGCAGA TGGATTTCCC CGGCTACGCC ATCGGCGGCG TCTCCGTCGG CGAGGGGCTG GATCTGCTAA AGAAAGTGGT GGAGTACACA GCGCCCTACC TGCCGGAAAA CAAGCCCCGC TACCTCATGG GCGTTGGACT CCCCGAGGAT ATCCTCGAAA GTGTCGAGCG AGGGATGGAC ATGTTCGACT GTGTTATCCC AACCCGTTAC GCACGCAGTG CCACCCTCTT TACAAACCGG GGAAAGATTC GCCTCACCAA CCGCAAATAC CGGCGCGACT TCTACCCCAT CGAGCCGAAC TGCACCTGTT ACACCTGCCG GAACTTCACC AGGGCATACA TCCATCATCT CTTCAACGCC AATGAAGTAC TCTCCGCTAT CCTTGCAAGC ATTCACAACG TTCACTTCTA TCTGAACATG ATGGCGGAAA TTCGCCGTGC AATCGAAGAG GGACGTTTTA CAGACTATAA GCGGGAATTT CTGGAATCAT ACCTGAAGGG CGCTTAG
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Protein sequence | MKFTLNKKDR KTAARRGTLV TPHGTIETPI FMPVGTHAAM KAMTPVQVKE TGAQIILSNT YHLHLRPGEE LVAKAGGLHS FMAWDGPILT DSGGFQVFSL PNKRITEEGA YFKHEVSGEE VFLDPARAIA IQEDLGADII MAFDECIPYP CDRKYAAKST RKTLRWAEQC KKAQTRKDQA LFGIVQGSVF EDLRAMCAKE LVQMDFPGYA IGGVSVGEGL DLLKKVVEYT APYLPENKPR YLMGVGLPED ILESVERGMD MFDCVIPTRY ARSATLFTNR GKIRLTNRKY RRDFYPIEPN CTCYTCRNFT RAYIHHLFNA NEVLSAILAS IHNVHFYLNM MAEIRRAIEE GRFTDYKREF LESYLKGA
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