Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_2375 |
Symbol | |
ID | 3740052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 2684673 |
End bp | 2685740 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637779667 |
Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
Protein accession | YP_385325 |
Protein GI | 78223578 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
TIGRFAM ID | [TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00000000189988 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCAAGA CAAGCAACCT GAAGGTCACG AGCATTACCC CCATCATCGC CCCTGCCGAC CTGCGGCAAG TTTTCCCCCA ATCGCTGGAA ACAGCTGAAT TCGTTAATGC GAGCCGGGCC CACATCAAGA ACATCCTCAA GGGGAAAGAC ACCCGCCTCA TGGTGGTGGT GGGCCCCTGT TCCATTCACG ACCCCAAGGC CGCCCTCGAC TATGCGGGGC GCCTTGCGCG ACTCGCCAGC GAACTCTCCG ACCAGCTTTT CATCGTGATG CGGGTCTACT TCGAGAAGCC CCGCACCACC ATCGGCTGGA AGGGGCTCAT CAACGACCCC GACATGAACC ACACCCACCA GATCTCCAAG GGACTCGGCA TCGCGCGGCG GCTCCTGAAC GACATCACCA GCATGCTCCT CCCCGTGGCG TGCGAGATGC TCGATACCAT CACCCCTGAA TACCTGGCCG ACTATATCTC GTGGGGCGCC ATCGGCGCCC GGACCACCGA GAGCCAATCG CACCGGGAGA TGGCGAGCGG CCTTTCCTTC CCCGTGGGCT TCAAAAATGG CACTGACGGC AACCTGCAGA TCGCCATCGA CGCCATGAAC GCGGCGCTCC ACCCCCACAG CTTCCTCGGC ATCAATCGGG ATGGCAAGAC CTCCATCATC CAGACCACCG GCAACCCGGA CGTGCACATC GTCCTGCGTG GCGGCAAGAA GCCCAACTAC TCTCCCGAGG ACATCGCCAA GACCGAAGAG ATGGTTGAAA AGGGGGGTAT CTTCCCGACC ATCATGGTTG ATTGCAGCCA CGGCAACTCG GAGAAGCGCC ACGAGAAGCA GCCGGAGGTG CTTGACAGCA TCGTCGACCA GATCGAGGCG GGCAATCGCT CCATCTCGGG GGTCATGATC GAGAGCTTCC TCGAAGCGGG GAACCAGCCC ATTCCCAAGG ATCTGTCCCA ACTCCGCTAC GGGGTCTCCA CCACCGACAA GTGCATCGAC TGGAAGACCA CCGAGGAAAT CCTGCGCAAG GCCCATGAAC GGCTCAAGCG CTGCGGCGGA AGACCGATGC ACGGTTGA
|
Protein sequence | MTKTSNLKVT SITPIIAPAD LRQVFPQSLE TAEFVNASRA HIKNILKGKD TRLMVVVGPC SIHDPKAALD YAGRLARLAS ELSDQLFIVM RVYFEKPRTT IGWKGLINDP DMNHTHQISK GLGIARRLLN DITSMLLPVA CEMLDTITPE YLADYISWGA IGARTTESQS HREMASGLSF PVGFKNGTDG NLQIAIDAMN AALHPHSFLG INRDGKTSII QTTGNPDVHI VLRGGKKPNY SPEDIAKTEE MVEKGGIFPT IMVDCSHGNS EKRHEKQPEV LDSIVDQIEA GNRSISGVMI ESFLEAGNQP IPKDLSQLRY GVSTTDKCID WKTTEEILRK AHERLKRCGG RPMHG
|
| |