| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2330 |
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| Symbol | |
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| ID | 3739491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 2637313 |
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| End bp | 2638323 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637779622 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_385280 |
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| Protein GI | 78223533 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0000000244593 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 80 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACGG TTCTCGTCAC CGGCGCCGCC GGCTTCATCG GATTTCACCT CTCCCAGAGA
CTCCTCGCTC GGGGCGACCG CGTGGTGGGT CTCGACAATC TCAACGACTA CTACGATGTA
AATCTGAAGC TGGACCGGCT TCGCCAGTTG GAGGGGCGGG AGGGGTTCCG TTTTATCCGG
GCGAGCCTGG CTGACCGACC GGCCCTGGAA GAGCTCTTTA GCGGCGAGCG CTTCGACGCG
GTGGTGAACC TAGCGGCCCA GGCCGGGGTC CGTTATTCCC TCAAGAATCC CCACGCCTAC
GTGGAGAGCA ATCTGGTCGG CTTTATGAAC ATCCTGGAAG GGTGCCGCCA CCACGGCGTG
AAGCATCTGG TCTACGCCTC GTCCAGCTCC GTCTACGGGG CCAACACGGC CATGCCCTTT
TCAGTCCACC ACAACGTGGA CCATCCGGTC TCCCTCTACG CGGCCACCAA GAAGGCCAAC
GAACTCATGG CCCACACCTA TTCGAGCCTC TACGGACTTC CTACTACGGG ATTGCGGTTC
TTCACGGTTT ACGGACCCTG GGGGCGGCCC GACATGGCGC TCTTCCTCTT TACCAAGGCT
ATCCTTGAGG GGCGTCCCAT AGACGTCTAC AACCACGGCA AAATGCAGCG GGACTTCACC
TACATCGACG ACATCGTCGA GGGGGTCATG CGGGTCATGG ACCGGACCGC CGAGCCCAAC
CCATCCTGGA GCGGCGACCA TCCCGACCCG GGCACCAGCT ACGCCCCCTA CCGGATCTAC
AACATCGGCA ACAACAGCCC GGTGGAGCTC TTGACGTTCA TCGAGACCAT CGAGAAGTGC
ATCGGCAAGC CGGCGGAGAA GAACTTCCTC CCCATTCAGG CGGGGGACGT GCCGGCCACC
TACGCCGACG TGGACGATCT GATGAACGAT GTGGGTTTCA AACCGGCCAC TCCCATCGGG
GAAGGGATAC GGCGGTTTGT TGAGTGGTAT CGGGAGTATT ACCATGTCTG A
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| Protein sequence | MSTVLVTGAA GFIGFHLSQR LLARGDRVVG LDNLNDYYDV NLKLDRLRQL EGREGFRFIR
ASLADRPALE ELFSGERFDA VVNLAAQAGV RYSLKNPHAY VESNLVGFMN ILEGCRHHGV
KHLVYASSSS VYGANTAMPF SVHHNVDHPV SLYAATKKAN ELMAHTYSSL YGLPTTGLRF
FTVYGPWGRP DMALFLFTKA ILEGRPIDVY NHGKMQRDFT YIDDIVEGVM RVMDRTAEPN
PSWSGDHPDP GTSYAPYRIY NIGNNSPVEL LTFIETIEKC IGKPAEKNFL PIQAGDVPAT
YADVDDLMND VGFKPATPIG EGIRRFVEWY REYYHV
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