| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2246 |
|---|
| Symbol | |
|---|
| ID | 3738063 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 2540211 |
|---|
| End bp | 2541764 |
|---|
| Gene Length | 1554 bp |
|---|
| Protein Length | 517 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637779538 |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_385198 |
|---|
| Protein GI | 78223451 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000000334479 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 6.92492e-16 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGCTTCTTA AAGAAATATT CAACAGAGGC CCCAAATTAT TCCCTACCAA AAGTGCAATA
ATAGACGGAG ATAGACGATT TACCTATAGA GAGGCAGGGG ATAGATGGAA TCGACTCGCC
AATGTCCTTG TTGATTGTGG TCTTAAGAAG GGGGATTGCC TCGGGTTTCT TCTGATGAAT
TGTGCTGAGA TTATTGATGC CTATGCTGCC GGTGCCAAGG CCGGTGTTGC GGTCGGTGGG
GTAAATTATC GTCTTGCTCC TGAAGGGATT AAAAAGGTGA TCGAGGATAT GGGCTGCCGC
GTGCTATTGG TAGGTGCCGA ATTTGTCGAC ACCATCAATT CCCTGAGACC TCACCTGCCA
TTTCTTGAAA CCTGTATATC GGTCGGGACC AAAGTGACAG GGATGCATGA ATATGAATCC
ATTATTGCCA AGGCTTCTAC TATGGAACCC GATGTGTCAA CTTCCGGCGA AGATCTTGCG
CACATTATAT ATACGACCGG CACTACCGGT GCCCCAAAAG GGGCCATGGC GACACGCCAG
ATTGCAATGA ACAGAATCAG TAGTGAGCTC ATAGAACTTT ATGTAGACGT CGATGATAGG
TTTCTTAATG TATTTCCACT TTTTCATGTG GGCTTTTATA CCTCATTGGC GTTCCTTTCC
AGGGGGGCGA CTGTTGCCAT TCTACGGGAA TGGGATCCTC AGAAATTTTG CAGTTCTGTG
CAGGATTATA AAATAAACAA AACAAATCTT GCGCCGGTGG TGGTGAATTT CCTGGTGAAT
TGGGCGGATG CGGCGAAATA TGATCTGAAT AGTTTGCAGT TAATAAAGTA TGGCGCGGCA
CCCATGCCTA TGGAGACTCT GAAAAAGGCC ATGAAATTGC TTCCTGACTG CAAGTTTACG
CAGTGCTACG GTTGTTCTGA GAGTTTTGGA GTCGTTTACC TGAGACCGGA GGAACATGCT
GCCGCTTTGA ATGGATCAAG TGAATCGGTT CGGAGGATGG GTTCATGTGG GAGAGAGGCC
GCTTTTTGCA TTGTACGAGT GGTCAACGAA AAAGGGCAGG ATGTGAAACC TGGTGAGGTT
GGTGAAATTC TGATCGGTGG AGGATTGGTC ATGACCGGAT ATTTGAACAA ACCGGAGGAG
ACTGCCGAAG CCATACGAAG CGGTTGGCTC CACACCAAAG ACATGGCAAT GGTGGATGAT
GAGGGATATA TCTATCTAGT TGACAGGAAG GCTTTCATGA TCATTACCGG CGGTGAAAAT
GTCTATCCGG CGCAGGTGGA AAATGTGCTG CACGATCATC CCAAGATTGC CGAAGTCGCA
GTAATAGGTG TGCAGGACGA TACCTGGGGC GAAGCGGTAA AAGCAGTTGT CGTTCCCAAA
AAGGGTGAAA TCCTTACCGA GGAAGAGGTG ATTGAATTCT GCCGGCCAAG AATGGCCAAC
TATGCGAAGC CTAAGACAGT TGTTTTCACC GATGCCTTGC TACATACGGC TACAGGGAAA
ATTGACAAAC TTGCTCTCAA GAAGAAATAC GAAAGTAGTA AGTTAAAGTG TTGA
|
|---|
| Protein sequence | MLLKEIFNRG PKLFPTKSAI IDGDRRFTYR EAGDRWNRLA NVLVDCGLKK GDCLGFLLMN
CAEIIDAYAA GAKAGVAVGG VNYRLAPEGI KKVIEDMGCR VLLVGAEFVD TINSLRPHLP
FLETCISVGT KVTGMHEYES IIAKASTMEP DVSTSGEDLA HIIYTTGTTG APKGAMATRQ
IAMNRISSEL IELYVDVDDR FLNVFPLFHV GFYTSLAFLS RGATVAILRE WDPQKFCSSV
QDYKINKTNL APVVVNFLVN WADAAKYDLN SLQLIKYGAA PMPMETLKKA MKLLPDCKFT
QCYGCSESFG VVYLRPEEHA AALNGSSESV RRMGSCGREA AFCIVRVVNE KGQDVKPGEV
GEILIGGGLV MTGYLNKPEE TAEAIRSGWL HTKDMAMVDD EGYIYLVDRK AFMIITGGEN
VYPAQVENVL HDHPKIAEVA VIGVQDDTWG EAVKAVVVPK KGEILTEEEV IEFCRPRMAN
YAKPKTVVFT DALLHTATGK IDKLALKKKY ESSKLKC
|
|---|
| |