| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2109 |
|---|
| Symbol | |
|---|
| ID | 3739445 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 2374764 |
|---|
| End bp | 2376185 |
|---|
| Gene Length | 1422 bp |
|---|
| Protein Length | 473 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637779403 |
|---|
| Product | Fis family transcriptional regulator |
|---|
| Protein accession | YP_385063 |
|---|
| Protein GI | 78223316 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 86 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGACA CAGAGCAGCA TCTGGAAGAG ATGCTTCGGC TGGCAAATTT CACCATAGAG
CGGACCGGCA CCCCCATTGT CTGGGTGGAC TCCACGACCC GTTTTGCACG GGTAAACGAC
GCGGCATGCC GGTGTTTCGG TTACTCGCCC GATGAATTCA TCCGCCTGAC TGCCCAGGAC
ATCGCCCCGG GGATCCCCAC GGAATTGTGG CCGCAGCACT GGGCAGAGCT GAAGCGGATG
CAATTCCGCA CCTTTTCGGA TCATTTCAGA AAACGCTCCG GGGAAAAGTT CCCGGTAGAG
GTCGAGGAAA ACTTCATCCG GTTCGAAGGG AGGGAATACT CCTGCAGCTT CATCAAGGAC
ATGACCCAGC ATTTCCAGAC CCAGGAAGCC CTGAGGCGGG CCTTGGACGA GGTGCAAACG
CTCAAAAACC GTCTGGAAGC CGAAAACGTG TACCTGATGA ACGAGATCAA ACTCTCCAAC
AACTTCGATG AAATAGTCAC CGGCAATCCC ATCTTCATGA AGGCCCTGCA GCTTGTGGAA
CAGGTTGCCC CCACCGATGC GTCCGTACTT ATCCTCGGAG AAACAGGCGT CGGCAAGGAA
CTCATCGCCC GCGCCATCCA TAACCTGAGC AACCGCCGTG ATCGCCCCCT CATCCGGCTC
AATTGCGCCG CATTGCCGGC AACTCTCATG GAAAACGAAC TTTTCGGCCA CGAAAGGGGA
GCCTTCACGG GAGCGAACTG CCGCAAACCC GGCAGGTTCG ACCTGGCTGA CGGGGGGACC
CTTTTTCTCG ACGAGGTGGG TGATCTGCCC ATGGAGTTGC AGAGCAAGCT TCTGCGTGTC
TTGCAGGAAG GGGAATTCGA GCGGCTCGGC GGCGCTGAAA CGATAAAGGT CGATGTACGC
ATCCTGGCCG CGACCCACGT GGATTTGAAA GCCCTGCTTG CCGAGGGGCG GTTTCGCAGC
GACCTGTACT ATCGCCTCAA TGTCTTTCCG ATCCAATGCC CCCCCCTCAG GGAACGCAGG
GAAGACATCC CCCTGCTGGT CAGGCATTTT GTCAAAGCCT CCTGCGAAAA GAACGGAAAA
AGCATCGAGC TTATTCCGCG CCATGTCATG GAGTCACTGG AGGGGTACCC CTGGCCCGGC
AATATCCGGG AACTGCAGAA CGTTATCGAA CGGGCGGTGA TCATCAGCCG GGGAAACAAG
CTGGAGATCG ACTCCCTCCC TAAAATGGTC ATAGCCGCCG ATGCAGCCCC CATCTCACCT
CTGGAAGTGA CCGAACGGGA ACATATCATC CGTGCTCTCG AAACAACGGC ATGGCGAGTC
GGCGGGCCAA AGGGCGCCGC TGAAATCCTC GGACTGAAAC GCACAACCCT CCAGGCGAGG
ATGCGCAAGC TCGGCATCAA CCGGCAGGGC CTGCCAGCCT GA
|
|---|
| Protein sequence | MADTEQHLEE MLRLANFTIE RTGTPIVWVD STTRFARVND AACRCFGYSP DEFIRLTAQD
IAPGIPTELW PQHWAELKRM QFRTFSDHFR KRSGEKFPVE VEENFIRFEG REYSCSFIKD
MTQHFQTQEA LRRALDEVQT LKNRLEAENV YLMNEIKLSN NFDEIVTGNP IFMKALQLVE
QVAPTDASVL ILGETGVGKE LIARAIHNLS NRRDRPLIRL NCAALPATLM ENELFGHERG
AFTGANCRKP GRFDLADGGT LFLDEVGDLP MELQSKLLRV LQEGEFERLG GAETIKVDVR
ILAATHVDLK ALLAEGRFRS DLYYRLNVFP IQCPPLRERR EDIPLLVRHF VKASCEKNGK
SIELIPRHVM ESLEGYPWPG NIRELQNVIE RAVIISRGNK LEIDSLPKMV IAADAAPISP
LEVTEREHII RALETTAWRV GGPKGAAEIL GLKRTTLQAR MRKLGINRQG LPA
|
|---|
| |