Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_2080 |
Symbol | |
ID | 3739531 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 2339231 |
End bp | 2341138 |
Gene Length | 1908 bp |
Protein Length | 635 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637779374 |
Product | respiratory-chain NADH dehydrogenase domain-containing protein |
Protein accession | YP_385034 |
Protein GI | 78223287 |
COG category | [C] Energy production and conversion |
COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit [COG3411] Ferredoxin |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0310665 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 72 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAAGGT TAAGCTCCCC TGAAAAATTG GAATGTGCCA GGAAGGACAT CGTCTCCCGC ATTGACCCGA CCAAGCCGTG CATCTCGGTA TGCGCCGGTG CCGGCTGCCT CGCCTCCGGG GCAGCCGAGG TCATCGCGGC CTTCAAGACG GAGCTTGAAT TCCATGGCCT GACGACTGAA GTGAACACCA AGGGAACCGG CTGTCCCGGC TTTTGCGAAC GCGGGCCCAT CGTGATGATC TACCCCGAGG GGATCTGCTA TCTCAAGGTG AAGCCCGAGG ACGTACCCGA GATCGTCTCC CACACCATCA AGGAGAAAAA GGTGGTGGAC CGCCTCCTCT ACGAGGATCC GGCCACGGGA ACAAGGGCGC TGCGGGAGTC GGATATTCCC TTCTACAAGA ACCAGCAGCG CAACATCCTC AGCGAGAACC TCCGGCTCGA TTCCAAGAGC ATGGACGACT ATCTCGCCAT CGGCGGCTAC TCGGCCCTCT CCAAGGTTCT CTTCCAGATG ACCCCGGAAG ACGTGATGGG GGAGATCAAG AAGTCGAACC TGCGGGGGAG GGGAGGGGGC GGATTCCCCG CCTGGCGCAA GTGGGAAGAG TCCCGCAATG CCCCGGACCC GATCAAGTAC GTGATCGTCA ACGCCGACGA GGGTGACCCC GGCGCCTTCA TGGACCGGGC GCTCATCGAG GGGAATCCCC ACTCGATCCT CGAAGGCCTG ATCATCGGCG CCTATGCGGT CGGTGCCCAT GAGGGGTTCA TCTACGTCCG CCAGGAATAT CCCCTGGCCG TCGAGAACAT CAACCTCGCT ATCCGGCAGG CCAGTGAGCG CGGGTTCGTC GGCAAGGATA TCCTCGGGTC GGGTTTTGAT TTCACCGTCA AGGTCCACAT GGGTGCCGGC GCCTTTGTCT GCGGCGAATC CTCGGCACTC ATGACGGCTC TGGAGGGGCG AGCCGGCGAG CCGCGGCCCA AGTACATTCA TACCGCTGTC AAGGGGGTCT GGGACCACCC GAGCGTCCTG AACAACGTAG AGACCTGGGC AAACGTTACC CAGATCATCA CCAAGGGGGC GGACTGGTTC ACCTCGTACG GCACCGCGGG GAGCACGGGG ACCAAGATCT TCTCCCTGGT GGGGAAGATC ACCAATACCG GCCTCGTGGA AGTGCCGATG GGCGTTACCC TGAGGGACAT CATCACGAAA GTGGGGGGAG GCATACCGGG AGGCAAAAAG TTCAAGGCCG TTCAGACCGG CGGCCCCTCC GGCGGCTGCA TCCCCGAGGC GATGCTGGAC CTGCCAGTGG ATTTCGACGA ATTGACCAAG GCAGGCTCCA TGATGGGTTC CGGCGGCATG ATCGTCATGG ACGAAGACAC CTGCATGGTG GACATCGCCC GGTACTTCAT CGACTTCCTC AAGGACGAAT CGTGCGGCAA GTGCACCCCG TGCCGGGAGG GTATCCGCCA GATGCTGGCG GTCCTCACCA GGATCACCGT CGGCAAGGGG AAAGAGGGGG ACATCGAGCT TCTGGAGGAG TTGGCCGAGT CCACGGGAGC GGCCCTCTGC GCCCTGGGCA AGAGTGCTCC CAACCCGGTC CTCAGCACCA TCCGCTACTT CCGTGATGAG TACGAGGCCC ACATCAGGGA GAAGAAATGC CCGGCCCTCT CATGCAAGGA GATGATCGCC TTCCATATCG ATCCGGAGAA GTGCAAGGCC TGCGGCAGCT GCTTCAGGCA GTGCCCCGCC GAGGCGATCC AGGGCGGCAA GAAGCTGATT CACATCATCG ACCAGGAAAA GTGCACGAAG TGCGGAACCT GCCTGGACGT CTGCCCGTCA CGCTTCGGCG CGGTGCGGAA GATTTCCGGC GAACCGGTTC CGGCCCCTGT CCCTGAAGAC AAACGAGCTA TTGCCTGA
|
Protein sequence | MTRLSSPEKL ECARKDIVSR IDPTKPCISV CAGAGCLASG AAEVIAAFKT ELEFHGLTTE VNTKGTGCPG FCERGPIVMI YPEGICYLKV KPEDVPEIVS HTIKEKKVVD RLLYEDPATG TRALRESDIP FYKNQQRNIL SENLRLDSKS MDDYLAIGGY SALSKVLFQM TPEDVMGEIK KSNLRGRGGG GFPAWRKWEE SRNAPDPIKY VIVNADEGDP GAFMDRALIE GNPHSILEGL IIGAYAVGAH EGFIYVRQEY PLAVENINLA IRQASERGFV GKDILGSGFD FTVKVHMGAG AFVCGESSAL MTALEGRAGE PRPKYIHTAV KGVWDHPSVL NNVETWANVT QIITKGADWF TSYGTAGSTG TKIFSLVGKI TNTGLVEVPM GVTLRDIITK VGGGIPGGKK FKAVQTGGPS GGCIPEAMLD LPVDFDELTK AGSMMGSGGM IVMDEDTCMV DIARYFIDFL KDESCGKCTP CREGIRQMLA VLTRITVGKG KEGDIELLEE LAESTGAALC ALGKSAPNPV LSTIRYFRDE YEAHIREKKC PALSCKEMIA FHIDPEKCKA CGSCFRQCPA EAIQGGKKLI HIIDQEKCTK CGTCLDVCPS RFGAVRKISG EPVPAPVPED KRAIA
|
| |