Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_2061 |
Symbol | |
ID | 3738655 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 2316532 |
End bp | 2318547 |
Gene Length | 2016 bp |
Protein Length | 671 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637779355 |
Product | Na+/solute symporter |
Protein accession | YP_385015 |
Protein GI | 78223268 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0591] Na+/proline symporter |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 0.274324 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCCCGA TTGAGATCGT TTCCACACTA TCTCTCCTTT ATATTGGCCT TCTGTATGCC GTAGCCTATT TTGCCGACAG ACGGCATGAG GCCGGCCGGA GCATCGTTGC CAACTCCTTC GTCTATTCCC TCTCCCTGGC CGTCATTTAC ACATCATGGA CCTTTTACGG TTCCGTGGGA CGGGCCGCCA CCAGCGGCAT CGAATTCCTC ACCGACAGCC TGGGGATAAC CCTCATGGCC TTCTGCTGGT GGTTCCTGCT GCGGAAGATG GTGCGGGTCA GCAAGGAGCA GAACGTTCGC AGCATCGCCG ATTTCATCTC CAGCCGCTAC GGAAAGTCAC CGCTCCTGGG GGCGGTCGTC ACCATTATCG TCATTGCGGC GTTCCCTCCG TACATTGCCC TGCAACTTAA AGCAGTGGCC CACACCTTCG ATCTCCTCAC AAAACCGCCC CACATCGCCG GCGGTCTGAA CAATCTCATC CCCGCGCTCC CCCCTTTCGT GGATACCGCG TTCATTGTCA CCCTGTTCCT CGCCCTTTTC GGCGTCCTGT TCGGAGCACG GCACCTGGAC GTCTCCGAGC GCCACGAGGG GCTGGTGGCC GCCATCGCCC TGCAATCGGT GGTCAAGCTC GTCGCCTTCG TCACCGTGGG GCTGTTTGTC ACCTATGGCC TGTTCGACGG CTTCAGTGAT ATCTTCTCAC GCTTTATCGC CCGATTCCCC GACCGCACAG ACCTCTTTCT CCTGGGGACA CCCCATGTTC CCCATTCGTT ATGGTTATCC CGAGTATTGA TGATCATGAT TTCGTTCATG TTCCTCCCCC GCATGTTCCA TGTCATGGTT ATCGAGAATG CCGACGAGGG GCACATTAAA GACGCCATGT GGCACCTCCC CACCTATGCC TTTCTCCTCG CCCTGTTCGT GCTGCCCGTA GCCCTGGGAG GCATCATCCT CAGCGGAGGG GATACCGCCA TGGCCGACTT TTTTGTTATC CACCTCCCCT TGGAGTCCGG TCATCCCTGG CTGGCCCTGT TGGCTTTCAT AGGAGGCTTT TCCGCTTCGG CGGGCATGGT CATCGTCGAA TCGGTGGTGC TCTCCACCAT GATTCTCGAC CATCTGGCCT TGCCGGTCAT TCTGAAGCTC AGGGTGGAAG CCTCGGACAT GTCGAAAGTT CTCCTGAACA TCAAACGGGC AGGGATCATT GCCATCGTCT TTTTCGGCTA CCTCTACTAC CGGTTCATCA GCGAATCATA CGCACTGATC AACACCGGTG TCGTCACGTT CATCGCCGTG GCCCAGTTCG CGCCGTCCGT CATCGGGGGG CTCTTCTGGA AGCGTGCCAA TCGTCGCGGG GCGCTGACCG GTATCCTGCT GGGATTCGTC GTCTGGTTCT ACACCCTGCT GATTCCCCTC TTTATCAACT CGGGCTGGCT GCCTGACGAT CTCCTTGATA ACGGCCCCTT CGGCCTCGGA TTTCTGCGCC CCCAGGAACT GTTTGGCCTG AGTGGTCTCG ACATGATCTC CCACGCCCTG TTCTGGACCC TGTTCTTTAA CCTGGGGGCT TTCGTTGCCT TTTCCCTCCT GAGCGACCCG GACGACAGCG GAACCGAACA GGCAGTGAAA TTCGTGGATG TTTTCGAGGT GCGCGATGAG TCGGTCACGC GCAAGAGGAT GAGCAAGTCC TTCGCCGTCG TGGAATTCGT GGATCTGATG ACCAAGTTCA TCGGCCAGGA CCAGGCCCAC GCCGCCATCG CCCGATTCCT CAAACACAAG CAGATCGATG AAAAGGGAAG CCTCTCGGAA TACGAGCTTC CCATCCTGAA GCGGTATACC GAGAAGGTTC TGGCCGGTTC GGTGGGGGCA GCATCGGCGG GGATCATCGT GGACAGCTAT CTGGCTGCGC GGGGAAGTGA ACTTGAGGAC GTTTTCGACA TTTTCGGTAC GGTTTCCCTC AGCCGCACCG CCAGCAGGGA ACAACTTGGC GTTCTCTACG AGGCTGCGCG GTTAGTGGCG ACCTGA
|
Protein sequence | MIPIEIVSTL SLLYIGLLYA VAYFADRRHE AGRSIVANSF VYSLSLAVIY TSWTFYGSVG RAATSGIEFL TDSLGITLMA FCWWFLLRKM VRVSKEQNVR SIADFISSRY GKSPLLGAVV TIIVIAAFPP YIALQLKAVA HTFDLLTKPP HIAGGLNNLI PALPPFVDTA FIVTLFLALF GVLFGARHLD VSERHEGLVA AIALQSVVKL VAFVTVGLFV TYGLFDGFSD IFSRFIARFP DRTDLFLLGT PHVPHSLWLS RVLMIMISFM FLPRMFHVMV IENADEGHIK DAMWHLPTYA FLLALFVLPV ALGGIILSGG DTAMADFFVI HLPLESGHPW LALLAFIGGF SASAGMVIVE SVVLSTMILD HLALPVILKL RVEASDMSKV LLNIKRAGII AIVFFGYLYY RFISESYALI NTGVVTFIAV AQFAPSVIGG LFWKRANRRG ALTGILLGFV VWFYTLLIPL FINSGWLPDD LLDNGPFGLG FLRPQELFGL SGLDMISHAL FWTLFFNLGA FVAFSLLSDP DDSGTEQAVK FVDVFEVRDE SVTRKRMSKS FAVVEFVDLM TKFIGQDQAH AAIARFLKHK QIDEKGSLSE YELPILKRYT EKVLAGSVGA ASAGIIVDSY LAARGSELED VFDIFGTVSL SRTASREQLG VLYEAARLVA T
|
| |