Gene Gmet_2009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_2009 
Symbol 
ID3739881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp2248267 
End bp2249646 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content49% 
IMG OID637779303 
ProductO-antigen polymerase 
Protein accessionYP_384963 
Protein GI78223216 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3307] Lipid A core - O-antigen ligase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGGTT TAGGTCTCAG TGAAATAGTT CCGTATGTGG TCTATGGACT GGCAGGCCCA 
GTGATTATTG CTTCTGCCGT TAATCGGAGT GCAATAGGAT TGCTCTTCCT GGTGCCGCTA
ATACCGCTCT ACGTCATTCT CGACAAGGTT CTGAAGTCGG AACTGCCGCT GGCTAACAAC
GTTATTGATT TCACTATTAT CGCAATGCTC TTGGGTATTT GTATTCAGAA GCGTGACGAC
GAAGTGCCGG CACTTGGCCC AAGTCCGCTC CTGAAACCTC TTGCGATATT CGCAGGGTAT
TCCTTTATCA GCCTGTTGAT AGGATCGGCG AGTTTTGACG GCTTGACGGG TGAGATAAAC
CTTCTCAGGC TTGCTCACTG GAAAAACTAC ATGATTATGC CGCTCCTCTA CCTGATTACC
TATTACGCTT TGCGCGAGAG GGCGTGGCAG AATAAGTTGT TCACGTTTCT TTTTGGGGCA
TTTCTAGTGG CGGACATCCG CTTCCAGCAA TCCTTTAAGT GGGTGAAGCA TACCCGTTAC
CAAGGGTCCA AAAGCCGGGT GAGCGGACTT GCCAATCTTG GGCCCAATGA GATGGGAGCT
TTCCACGCTA TTCATATGCT TTTTGTCCTT GGCCTTTTTA TCATCGACAA GAATGTCAAA
CGCCGCATCG CCTATGTGTT CTTCATGATA GGGAGCACTT ATTGCGCTCT TTATTCTTAC
TCACGGGGGG CTTACGTAGC TATTCTCCTT ACCGCCATTT TTATCGCATT CGTCAAGGAA
CGCAGGTTGC TCATTGTCAT TGTCGCATTC CTCATAACCT GGAAAGCGAT CCTTCCTTCA
TCGGTTGTGG ACAGGATTGA GAATACCATC GTTGAGGACG GCGCTCGTAC TGATGTCGTT
GAGGTCGGCG GCATGCAGCT CGAAACGGCA AAGAGGACCG AAATCTGGGA AAAGGCTTTG
GGGTATTTCT ACGAGAACCC CATAACCGGC AAAGGATACA ATACATACCA GTATCTTACC
GGTTGGGATA CCCATAACGT GTACATTAAA TTCATGGCAG AGGAGGGAGT CATTGGCCTC
TCTCTGTATA TCTGGCTGTA TGTTCTTGCT CTTCGCAGTG GCTGGAAGCT TTACAAAAAT
GGTGATGAAG AGATCATAAA GGCATTCGGG TTTGGTTTCG TCTGTGCCGT GATTGCATCG
ATTGTCTCGA ATTTTTTCGG CGACCGATGG ACGTATCTTC AACTTGGCGG CATCTACTGG
GTGCTCTGGG CACTGGTTGA CCAGCACAAC GCTCGGATTG CGGCTTCTGT GACTGACGTC
GTGGCTGTTC CCGCTGCCCC TGAAATGGAC CATTTCCCGA ACAGTAGGAT TGCGTCATGA
 
Protein sequence
MLGLGLSEIV PYVVYGLAGP VIIASAVNRS AIGLLFLVPL IPLYVILDKV LKSELPLANN 
VIDFTIIAML LGICIQKRDD EVPALGPSPL LKPLAIFAGY SFISLLIGSA SFDGLTGEIN
LLRLAHWKNY MIMPLLYLIT YYALRERAWQ NKLFTFLFGA FLVADIRFQQ SFKWVKHTRY
QGSKSRVSGL ANLGPNEMGA FHAIHMLFVL GLFIIDKNVK RRIAYVFFMI GSTYCALYSY
SRGAYVAILL TAIFIAFVKE RRLLIVIVAF LITWKAILPS SVVDRIENTI VEDGARTDVV
EVGGMQLETA KRTEIWEKAL GYFYENPITG KGYNTYQYLT GWDTHNVYIK FMAEEGVIGL
SLYIWLYVLA LRSGWKLYKN GDEEIIKAFG FGFVCAVIAS IVSNFFGDRW TYLQLGGIYW
VLWALVDQHN ARIAASVTDV VAVPAAPEMD HFPNSRIAS