Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_1988 |
Symbol | |
ID | 3739210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 2217824 |
End bp | 2218654 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637779282 |
Product | nicotinate-nucleotide pyrophosphorylase [carboxylating] |
Protein accession | YP_384942 |
Protein GI | 78223195 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0157] Nicotinate-nucleotide pyrophosphorylase |
TIGRFAM ID | [TIGR00078] nicotinate-nucleotide pyrophosphorylase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.103319 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGGCA TAGACAAGAT CATCGAAAAC GCCCTCATGG AGGATATTCA TACCGGGGAT ATCACGACTC TGGCGGTGGT TCCCGGGAGC CGTCCGGCCC GCGCCCGACT CATCGCCAAG GAGCCCCTGA TTCTGGCTGG CATTGACGTG GCGGCCCGGG TCTTCACGTT CCTTGACGCG TCGGTCTGTT TTGAGGCACG ACATGGGGAC GGAGCGCGGC TAGCTGCCGG CGATCTGATT GCCGAGCTTA CCGGCGACTC CGCTCTCCTC CTCCAGGGTG AGCGGGTGGC TCTCAACCTG CTTCAGCGCA TGTGCGGCAC CGCGACCCTT ACGGCCAGGT ATGTGGAGGC CGTGGCGGGA ACGCGGGCTC GCATCGTTGA TACGCGGAAG ACAACTCCGG GGCTCCGGGT CCTGGAGAAA TACGCCGTTC GGGTTGGCGG GGGAATCAAC CACCGCACCG GCCTCTATGA CGGTGTCCTC ATCAAGGAGA ACCACATCGC CGCCGCGGGC GGCATCAGCC GGGCCGTAAG CCGGGCACGG TCCTACATCC CCCATACCCT GAAAATTGAG GTGGAGACCG AATCCATCGC GGAGGTGACC GAAGCACTTG AGGCCGGTGC CGATATCATC ATGCTCGACA ATATGGATCT GCCGACGATG ACTGAGGCGG TGGCCCTCAT TGGTGGCCGT GCCCTGGTGG AAGCCTCGGG GGGGGTAAAC CTCGAAACAG TCAGAGGAAT TGCCGAGGCA GGGGTTGACA TCATTTCCGT GGGGGCGCTT ACCCATTCTG CCCGAGCCAT GGACATCTCG ATGCTTCTGG AGGCTGAGTG A
|
Protein sequence | MTGIDKIIEN ALMEDIHTGD ITTLAVVPGS RPARARLIAK EPLILAGIDV AARVFTFLDA SVCFEARHGD GARLAAGDLI AELTGDSALL LQGERVALNL LQRMCGTATL TARYVEAVAG TRARIVDTRK TTPGLRVLEK YAVRVGGGIN HRTGLYDGVL IKENHIAAAG GISRAVSRAR SYIPHTLKIE VETESIAEVT EALEAGADII MLDNMDLPTM TEAVALIGGR ALVEASGGVN LETVRGIAEA GVDIISVGAL THSARAMDIS MLLEAE
|
| |