Gene Gmet_1959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1959 
Symbol 
ID3740139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp2184106 
End bp2184906 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content57% 
IMG OID637779253 
Productcondensin subunit ScpA 
Protein accessionYP_384913 
Protein GI78223166 
COG category[S] Function unknown 
COG ID[COG1354] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.000817707 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACG GCGGGAATCT TGACCTCTAC CAGGATGAGG AGAGCCCCTC CTATACGGTG 
AAGCTCGAGG TCTTCGAGGG GCCCCTCGAC CTCCTGCTCC ACCTCATCAG GAAGAATGAG
GTGGACATCT ATGATATTCC CCTCTCAACA ATCACGAAAG AGTACCTTGA GTACATCAAG
ATGATGAAGG AGCTCAACCT GGAGATTGCC GGCGAGTTCC TCGTCATGGC ATCAACTCTC
ATCCAGATCA AGTCGAAGAC GCTTCTCCCG ACGCCGGTCG ATGAAGATGC CCCGGAAGAA
GAGGAGGAAG ACCCGCGGGC CGAGCTGGTA CGGCGTCTTC TCGAATACCA GAAGTACAAG
GAAGCGGCAG TATCTCTGAC CGGGCGGGAT CTGCTCGGCC GGGATACCTA CGCCCGAAGC
TTTATCTCCC CCGAGCTGGC GGAGATGCTG CCCGAGGAGG AACCGGTCGA GGTGGAACTG
TTCGAGCTGA TAGAGGCATT CCGGAAGGTT CTCGACCGGG TTTCCGAGGA GAGCTTCCAC
GAGGTGGGGG CCGAGTCGAT CACCATCGCC GAGCGGATCA ACGAGATCCT CTCACTCCTG
GAGGGGAAGG AATCGCTTCT CTTCGACGAG CTTTTTCCCG AACACTTCAA CAGAGATTTC
CTCATTGCCA CGTTCCTGGC CGTGCTTGAA CTCTGCAAGC TCAAGATGGT GAAGGTGGTC
CAGGCAAACC GCTATGGCTC CATCTGGATA CAGCCTGCGG TCATGGATGG GGAGGGGAGT
CTCGTCGATG CCGAATCTTA A
 
Protein sequence
MSNGGNLDLY QDEESPSYTV KLEVFEGPLD LLLHLIRKNE VDIYDIPLST ITKEYLEYIK 
MMKELNLEIA GEFLVMASTL IQIKSKTLLP TPVDEDAPEE EEEDPRAELV RRLLEYQKYK
EAAVSLTGRD LLGRDTYARS FISPELAEML PEEEPVEVEL FELIEAFRKV LDRVSEESFH
EVGAESITIA ERINEILSLL EGKESLLFDE LFPEHFNRDF LIATFLAVLE LCKLKMVKVV
QANRYGSIWI QPAVMDGEGS LVDAES