| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1915 |
|---|
| Symbol | |
|---|
| ID | 3740319 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 2137982 |
|---|
| End bp | 2140378 |
|---|
| Gene Length | 2397 bp |
|---|
| Protein Length | 798 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637779207 |
|---|
| Product | DNA internalization-related competence protein ComEC/Rec2 |
|---|
| Protein accession | YP_384869 |
|---|
| Protein GI | 78223122 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0658] Predicted membrane metal-binding protein
[COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
|---|
| TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein
[TIGR00361] DNA internalization-related competence protein ComEC/Rec2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.00143186 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGACCGGAA GGCCCCTTCT TGTTCCACTC CTCGGCATGG TGGGCGGCCT TGCCTCTGCC
CACCATCTTG GTATCGTACT CCCGTACCAG TTCCTTCCGG GACTCCTTGT GGCCGCTCTG
GCGGCTGTCT TCCTCAAAAG CCGCATCCCG TTCACGATAA TCCTCATCGC TCTGTTTTTC
GTCTGGGGGA GTGCTGCACT CCACCCGTTT CTCGCCCCTG TACACCCACC ACACCATCTT
GTGCATAGTA CCGATTCGAA ACCGGTCATA GTTGAGGGGA TCGTCGGCGT CCGACCCGAA
GCCTCGGAAG GGGGGATGAG AATCATTCTC AATGTCGACC GGATTATTCG GGACGAAAAA
TGCACTGCGG CCATCGGTCG TCTCTTGGTT TACGTTCGTG AGGGGAGGGG GACCATTCTG
ACCGGCGACC GGGTAAGGCT CGAAGCCCGG ATCCGTGAAC CGGCAAATTT CGGGCTTCCG
GGAGAATTCG ACTACCGTCG CTACCTTGCC TACCGTAACA TCTGCGCCAC GGCGTCAATC
AAGAGTGCCG ACGACATACT CCTGATCCGC GAAGCGACAG CACATCCGGT CCAGCGTTGG
TTTGACCGGC TGGCCGCGGA GCTAGGCGGT TTCATTGGCA GCAGTGCGCC GGCCGAGGGG
GGCTTGCTCA GGGCGATCCT CGTGGGAGAA CGTGGTTTCG TTACGGAAGA CACCGAGGAT
ATCTACGCCC GCGCCGGGGT TAACCACATC CTCTCCATCT CCGGCTTCCA TATCGGGGTA
ATCGCCCTCA CCATCCACTA TCTCCTTTTT CACCTCCTCG TTCGGTGTGA ATTTCTCACC
CTGCACCTGA ACCTTCGGCG CACCGTCCTT CTGGCCACGC TCCCCCCTGT CGTCTTCTAC
CTCTTTATTG CCGGACTGGC TCCGGCCACG GTCCGCTCGG TAGTGATGAT CGCCCTTGTA
ACCCTGGCGC TTTTCCTTGA GCGGGAGACC GATTCCCTCA ACACATTGAC GGCAGCCGCC
TTCGGCATTC TGATGTTCAA CCCCCAAGCC CTTTTCGATA TCTCGTTCCA GCTCTCGTTT
CTTGCCATCT GGGGGATACT GGTTCTGACG CCCCTCTGCA TGGAACCTTT TGGCGATTTA
CGGGAAGGCA CACTGAAGAA GGTACTGCTG TTTGCAGCCG TATCGGTCGC CGCCACCATA
GTCACGCTTC TTCCGGTGGT TCACACCTTT CACCGGGCAT CGGTCGCCGG GCTCGTCGGA
AATTTCGTGG CGGTTCCTCT GTTGGGGTAC GGAGCAGTAG TGGCAGGGTT TTCCGCTCTG
CCGCTTATTT ACCTTTTCCC TGCGGCGGCT AAATTCCTCC TTGGAATCGC CGCGTGGCTG
GTGAGAATTT CCGACGGAAT CATGGCGACC GTGGCCCAAA TTCCGCCTCT CCCTGTGCGA
AACGCGACCC TCGCGGACCT CTTCATTCTC TACCTTGCCC TCCTGGCGCT CTCACTCGTC
AAGGGAAAGC GAATCCATTA TCTCCTCTGC GCACTGGCTG CGGGGCTTGT GCTGGCGCTT
CATCTGCCGG CGGTGGCTGA TTCATCGAAA ACACTCAGGA TCACCTTTTT CAGTGTGGGG
CAGGGGGAGT CGACCCTTGT CACGTTCCCT GACGGCAGAC GAATGCTCGT GGATGGCGGC
GGCTCTCCCC ACGAAGGCGG AATGGATGTA GGGAGGCAGC TTCTGGCCCC GGCACTCTGG
AGCATGGGGA TTGGCCGACT CGACGTGGTT GTTCTGACTC ACCCCCATCC CGATCATATC
AAAGGGCTTA TTTCTCTTGC CGCCCTGTTC CCCATCGGTG AGTTCTGGGA AAGTGGCATC
ACAACACCAG TCGGCGACCA TGCAAAGCTC CGGGAGATTC TTGCCGCTCA CCGGGTTCCG
GTTCGATACA TTACTTCTTC CTCTCCCCCA TTTTCTGTCG GCAACGTTCG GATTGAACCC
CTGGCTCCGG CACACCGCCC CCTTGCAGAG CCGGATAGCG ACCAAAACGA TGATTCCCTC
GTATTCAGGC TCACGCATGG AACGTTCAGC ATGCTCTTAA CCGGTGACAT TGGCAGTTAT
GCCGAGGAGC GGCTTCTGTA CGAGCCGGAA AGACTCGCCT GCACGGTCCT CAAGGTGCCC
CATCACGGCA GCCGTCACTC TTCGTCGCCC CGCTTTCTCG ATGCAGCCTC CCCCCGTCTG
GCGCTCATTT CAGCCGGAGC CCGCAACAGC TTCGGCCTTC CGTCGCCGGA AACCATTTCA
CGTCTGAGGA AGCGCGGCGT TTCGGTCTGT CGCACCGACC TGAACGGGAC GATCCAGGTG
GCAAGCGACG GGAACGGATA TTCGGTCAAA ACCTTCTCGG ACGGGCATTT TCATTGA
|
|---|
| Protein sequence | MTGRPLLVPL LGMVGGLASA HHLGIVLPYQ FLPGLLVAAL AAVFLKSRIP FTIILIALFF
VWGSAALHPF LAPVHPPHHL VHSTDSKPVI VEGIVGVRPE ASEGGMRIIL NVDRIIRDEK
CTAAIGRLLV YVREGRGTIL TGDRVRLEAR IREPANFGLP GEFDYRRYLA YRNICATASI
KSADDILLIR EATAHPVQRW FDRLAAELGG FIGSSAPAEG GLLRAILVGE RGFVTEDTED
IYARAGVNHI LSISGFHIGV IALTIHYLLF HLLVRCEFLT LHLNLRRTVL LATLPPVVFY
LFIAGLAPAT VRSVVMIALV TLALFLERET DSLNTLTAAA FGILMFNPQA LFDISFQLSF
LAIWGILVLT PLCMEPFGDL REGTLKKVLL FAAVSVAATI VTLLPVVHTF HRASVAGLVG
NFVAVPLLGY GAVVAGFSAL PLIYLFPAAA KFLLGIAAWL VRISDGIMAT VAQIPPLPVR
NATLADLFIL YLALLALSLV KGKRIHYLLC ALAAGLVLAL HLPAVADSSK TLRITFFSVG
QGESTLVTFP DGRRMLVDGG GSPHEGGMDV GRQLLAPALW SMGIGRLDVV VLTHPHPDHI
KGLISLAALF PIGEFWESGI TTPVGDHAKL REILAAHRVP VRYITSSSPP FSVGNVRIEP
LAPAHRPLAE PDSDQNDDSL VFRLTHGTFS MLLTGDIGSY AEERLLYEPE RLACTVLKVP
HHGSRHSSSP RFLDAASPRL ALISAGARNS FGLPSPETIS RLRKRGVSVC RTDLNGTIQV
ASDGNGYSVK TFSDGHFH
|
|---|
| |