| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1901 |
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| Symbol | |
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| ID | 3740305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 2121374 |
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| End bp | 2122339 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637779193 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_384855 |
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| Protein GI | 78223108 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.00273857 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00000000000094829 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACAGAC GCGACTTTCT CAAAACCTCG GGCCTGGCTT TGGCTGCTGC TGCCACTCCC
TTCGGCCGTT TCGCCTGGGC CGGCGGGGCC ACACTTTCCC TTAAGATCGG TTATCTCCCC
CTCACCGATC ACCTCCTCAT GATTGCCGCC GAGAGGGAGC AGTTCAAAAA CATCCGCATC
AAGCCGGTGA GGTTTTCCTC ATGGCCCGAG ATCGCCGAAG CCCTGAAGAA TGGGAAAATC
GACGGCGGTT TCCTCCTCAC TCCCATGGGG TTGGCGCTCC GCCAAAAGGG GGCACCGATC
AAAGTGGTGC TCCTGGGGCA CCGTAATGGC AGCGCCATAA CGGTAAAAAA TTCACCCGAT
ATCAACCGTA TCACGGATTT GCGGGGCAAG ACCGTCGCCA TACCGAGTCC TTTTTCGACT
CACAACCTGC TGCTGCGCAA GGCCTTGAGC GAGAAGGGGC TGGTGCCGGG GCGGGACGTG
AAAGTGATAG ATATGGCGCC TCCCGAGATG CCGGTTGCAC TCGCCACCGG CCGGATCCAC
GGCTTCATGG TGGCCGAGCC TTTCGGTGCC CAGGCCGAGG CCCAGAAGGT GGGAAAGATC
CTCGTTCTCT CCAAGGATAT CTGGAAAGAC CACATCTGCT GCACCCTTAA CCTGCAGGAA
AAGATAATCC AGAGCTATCC TGCCGAGGTA CAGGAACTGG TTACGGGGCT TATCCGTACC
GCTTCTTTCA TTGAGTCCAA GCCGGCCGAA GCGGCCAGGG GATCGGTAAA GATTCTCGGC
CAGCGCCCGG AGATCGTAGA GAAAGTCCTC ACTACTCCTC AGGATCGCCT CACTTTCCGA
AATTTGGCTC CTTCACGGGC AGATTTCGTC GCCATTCAGG ACTACATGGT GAAGTTTGGG
GTTGCGAAAG CCAAGGTGGA TCTGACTGGC TATCTGGATG ACCGCTTTGC GAAGAGGAAA
GGGTAG
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| Protein sequence | MNRRDFLKTS GLALAAAATP FGRFAWAGGA TLSLKIGYLP LTDHLLMIAA EREQFKNIRI
KPVRFSSWPE IAEALKNGKI DGGFLLTPMG LALRQKGAPI KVVLLGHRNG SAITVKNSPD
INRITDLRGK TVAIPSPFST HNLLLRKALS EKGLVPGRDV KVIDMAPPEM PVALATGRIH
GFMVAEPFGA QAEAQKVGKI LVLSKDIWKD HICCTLNLQE KIIQSYPAEV QELVTGLIRT
ASFIESKPAE AARGSVKILG QRPEIVEKVL TTPQDRLTFR NLAPSRADFV AIQDYMVKFG
VAKAKVDLTG YLDDRFAKRK G
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