| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1895 |
|---|
| Symbol | |
|---|
| ID | 3739172 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 2116507 |
|---|
| End bp | 2116959 |
|---|
| Gene Length | 453 bp |
|---|
| Protein Length | 150 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637779187 |
|---|
| Product | MarR family transcriptional regulator |
|---|
| Protein accession | YP_384849 |
|---|
| Protein GI | 78223102 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 0.409274 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00000000000000377127 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGCATGAAA ACCTGTGTTC CAAATTGAAC TACCTGGCCC GCTTGCTGCT CTCGAAAGTC
AATGAGGAAA CAAGCCATTT CGGGGTCACC CAAGGGCAAC TGCCGGTTCT TTGCTGCTTA
AACGAAAAGG AAGGGCAGAC CCAGTCAGAA CTTTGCAAAA ACATACAGGT TGAGCAGCCG
ACCATGGCCA ACACGTTGCG GCGAATGGAG CGCGATGGCC TGATTTATCG GAATACTAGT
GAGCATGACG GGCGCCAATC GCAGATTTTC ATATCAACCC AGGTCCGTCC GGTGATTGAA
GTTCTGCAGG CGAAACGCGA CGAAGTTATC TCCAGAATGT TGCGGGAGAT GTCGGTTGAA
GAGCGGGACA CTTTCGAACG GTTAGTCGAT ATGGCGGTGA AGGGACTTGA TGACCGGCAC
CAACAGACTG AACGAAAAAA GGAGGATGTG TGA
|
|---|
| Protein sequence | MHENLCSKLN YLARLLLSKV NEETSHFGVT QGQLPVLCCL NEKEGQTQSE LCKNIQVEQP
TMANTLRRME RDGLIYRNTS EHDGRQSQIF ISTQVRPVIE VLQAKRDEVI SRMLREMSVE
ERDTFERLVD MAVKGLDDRH QQTERKKEDV
|
|---|
| |