| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1893 |
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| Symbol | |
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| ID | 3739170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 2109402 |
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| End bp | 2113004 |
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| Gene Length | 3603 bp |
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| Protein Length | 1200 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637779185 |
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| Product | DNA helicase/exodeoxyribonuclease V, beta subunit |
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| Protein accession | YP_384847 |
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| Protein GI | 78223100 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | [TIGR00609] exodeoxyribonuclease V, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000000000000174869 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAAACCT ATAACAACCT CACCATCGAC CTATCGGGCC GCAACCTCAT AGAGGCCAGC
GCCGGCACCG GCAAGACCTA CGCCATTGCC TGCCTCTACC TGCGACTTGT GGTGGAACGG
GGGCTCAAGC CCGAGGAGAT CCTCGTGGTC ACCTTCACGG AGGCGGCCAC CAAGGAGCTT
CGCTCCCGGA TCCGGGAGCG GCTGCGGGAG GCCCGCGATG TCTTCGCCGG GGCCGGAACG
ACTGACGACT TCCTCCTGAA GATGGGCGAC ACCAACCGGA AAGAATGGCC GGGGACCGAG
GAAGCCCTCC GGCGCCTCGA CCTGGCCCTG CGGACCTTCG ACTGCGCCGC CATCTCCACC
ATCCACGGCT TCTGCTCCCG GGCCCTGCAG GAAAACGCCT TCGAGAGCGG CTCCCTCTAC
GACACGGAGC TTCTGGCCGA TCAGAACCCC CTCATTCAGG AGATCGTTGA CGACTTCTGG
CGCCAAAGCT TCTTCGGGGC CGAGGCGCCG CTCCTTCCCC ACGCCCTGCG GCTCAAGTGG
TCCCCCGAAG GGCTTGCCCG CTTCCTCCGG GGGAAGCTCG GCAACCCTGA ACTGCTGGTG
GTTCCCCTCT ACGGCGACGA CGAGGTGGCG GCCCTTGTCA GTGAGTGCGA GGCCCTCTAC
GGCGAACTGA CCCGTATGTG GGAGTCGAGG CGGGGTGAGA TCGAGGAGAT AATCGCCACC
CACAAGGGGC TGCGCCGAGC CCAGAAAAAC TATCACCCTG ACCTGGTTCC CGGCCTTCTG
GAGGGGATGG CGGATTACAC TGCCTCGGGT AATCCGTGGG ATCTCTGCCC GGGGTTCGAG
AAGTTCACCA CCGCCTATAT CCAGGGCCAG GCCCTGCAAA AGAACGAGCC GCCGGAGCAC
CCTTTCTTCG ACCTCTGTGA CCGGCTGTTC CGCATCGTGG AGAAGCGATT CCTGGCCCTC
AAGGGGAGCC TCTTTACCTT TGCCAGGGAG CGTCTCTCCC TCCTCAAGGC TGAGCGGGCC
GTCCGCTCCT ACGACGATCT CCTGACGGAC CTCTACCGGG CGCTCCAGGG GCCCACCGGG
GCTGATCTGG CCGATCGGCT CGCAAGCCGC TACCGGGCGG CCCTCATCGA CGAGTTCCAG
GACACCGATC CGGTCCAGTA CCGGATCTTC AGGGAGATCT ACCTGGATGC GGCCACACCC
CTCTTTCTCA TCGGTGATCC CAAGCAGGCC ATCTACAGCT TCCGGGGGGC CGATATCTTC
GCCTACCTGG AGGCCCGGAA CGATGTCCCC GCGGAGAACC GCTTCACCAT GGGGGAGAAC
TGGCGCTCCA CCCCATCCAT GGTGGAGGGG ATCAATGCCC TGTTTCGGCA GAAGCGTGAA
ACCCCCTTTG TGGTGGAAGC CATCGGCTAC CCGGAGGTGA CGGCGGCTAA ACGGGAAGAG
CCCCTCCTTC TCGACGGCCG CGACCCGGCC CCCCTCCAGC TCTGGTTCAT GGCACGGACT
CCGGAGGACG GCGCGGGCAT ATCCATGGGG CCGGCCAGGG AACGAATAGT GATGGCTGTG
GGGGCCGAGA TTGCCGGGCT GCTCGCCGAC GGCCGGGAGG GGCGAGCCAC CATCGACGGC
AGGGGGGTGG TGCCCGAGGA CATTGCCGTC ATCGTCCGGA GCCACAAGGA GGCTGCCCTT
GTCCAGGAAG GGCTGCGGGG GCTCGGTATC CCGTCGGTGG TCCAGAGTGC CATGAGCCTC
TTTGCTACGG AAGAGGCCCG GGAAATCTGC CGGATATTGG AAGCTGTCGC CGAACCATCC
AGCGAAACCA GGGTGCGGGC CGCCCTTGCC ACGACCATCC TTGGCATGTC TGGCAACGAT
ATCGCCCGCC TCCTGGAGGA CGAGCGGGGC TGGGAGGAGC GACTCGAAGC GTTTCGGGAG
TACCACGATT TCTGGCAGGG ACGCGGCTTC ATGACCATGT TCCGGACCCT CCTGGCCCGG
GAGGGGGTGC GGGAGCGGCT TCTCCCATTT GTGGACGGGG AGCGGCGGCT TACCAACGTC
CTCCATTGCG GTGAAGTTAT CCATGGAGCC GCCATGGAGG GGAGTCTCGG TGTGGCCCCC
CTATGCGCCT GGTTCGGCGA GCGGGTAAAT TCGCCCCCTC CCGACGAGGA GTACCAGATC
AGGCTCGAAT CGGACGAAAA GGCGGTACGG ATCGTTACCG TCCACGTGAG CAAGGGGCTC
GAATACCCCA TCGTCTTCTG CCCCTTCACC TGGGGGGGCG TCCGGGATGA CGACGATACG
GCCGTCTGCC ACGACGGCTA CCGGATGGTG GCCGATTTCG GTTCTGACGA CTATAAATCC
CGACGCCTGA AGGCGCGCAA CGAGGCCCTG GCCGAAAACG TCCGGCTTCT CTACGTGGCC
CTCACCCGGG CCAGGCACCG CTGCTATCTG GTCTGGGGCA AGTTCCGCTA CGCCGAGACC
TCGGCCCTGG CCTATCTCCT CCACCATCCC GCCGACAGCC GCGAATGCGA CATTAAGGCG
GTACTTGGCG AGGTGATGAA GGGTATCTCC GATGAGGCGC TCCTGAAACG CCTTGATGGC
CTGAAAGAGG AGGGGGGAGG GGCCATTGCC GTTACCGTTG ATCCTGCGCC CGAAGCCGCA
AGTTTTCGGT CAGGGCCGGA GGGAGCGGCA ACTCCAGTTT GTCCCCCCTT CGGCAGAAAG
ATCGAGAGCG ACTGGAGGGT TGCGAGCTTC ACCTCCTTTG CGGCACGGCA CCGCCCCGAG
GAGGAACTTC CCGACCGGGA CCAGCCTGCC ACCGTCGTTG CCGATTCCGA AACGGCAGTT
TTTGAGGTTT TGCCGGCAGA GGGGACTATT TTTGCCTTCC CCAAGGGATC CCAGGCGGGG
ATTGTCCTCC ATGCCGTTTT CGAGAACCTT GATTTTGCCG CTGCCACCGA CGCAAAGGTG
GTAAGCGTCG TGGCCCAGGA ACTGGCGCGC CACGGTTTCG GCGAAGAGTG GCGCGGGGCG
GTTTGTGCCA TGGTTCGCAA CGTCCTGGAT GCCCCCTTGG ACAAAGGGGA TAGTGCTTTC
CGGTTGGCCG ACCTGGCGCC GCACAGTTGG CGCGCTGAGA TGGAATTCTT CTTCCCCCTC
CGGTTCGTGG GATCAGAACA GGTGGCTGCG GTGCTGCGCA GGTGGGGTGC ACTTCCCGAC
GGTGCCACCC TTGCGGAAGT GGCCGCCCGG CTTGATTTCT CTCCAGTGCA GGGGATGGTG
CGCGGCTTCA TGGATATGGT CTTTGAGCAC CGGGGAAAAT ATTACCTGAT CGACTGGAAA
TCGAACCATC TTGGCAACCG TGTTGACGAT TATGGCCGTG AGAACCTGGG CCGGGAGATG
GAGCGCAAGC TCTATCCTCT CCAGTACCTC CTCTACACGG TGGCCCTCAA CCTTCACCTG
AAGCAGCGGG TTCCCGGATA CCGGTATGAG ACCCACTTCG GCGGTGCCCT GTATGTCTTT
CTCAGGGGGG TGGAGCCCGG GCGTCCCGGC TGCGGCATCT ACCACGATAT CCCCCCGAAG
GGGCTGATAG ACGAGCTTAC CTCGTGCCTG GTGGCACTGA AGGAGCACAA TGATGGCGCC
TGA
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| Protein sequence | METYNNLTID LSGRNLIEAS AGTGKTYAIA CLYLRLVVER GLKPEEILVV TFTEAATKEL
RSRIRERLRE ARDVFAGAGT TDDFLLKMGD TNRKEWPGTE EALRRLDLAL RTFDCAAIST
IHGFCSRALQ ENAFESGSLY DTELLADQNP LIQEIVDDFW RQSFFGAEAP LLPHALRLKW
SPEGLARFLR GKLGNPELLV VPLYGDDEVA ALVSECEALY GELTRMWESR RGEIEEIIAT
HKGLRRAQKN YHPDLVPGLL EGMADYTASG NPWDLCPGFE KFTTAYIQGQ ALQKNEPPEH
PFFDLCDRLF RIVEKRFLAL KGSLFTFARE RLSLLKAERA VRSYDDLLTD LYRALQGPTG
ADLADRLASR YRAALIDEFQ DTDPVQYRIF REIYLDAATP LFLIGDPKQA IYSFRGADIF
AYLEARNDVP AENRFTMGEN WRSTPSMVEG INALFRQKRE TPFVVEAIGY PEVTAAKREE
PLLLDGRDPA PLQLWFMART PEDGAGISMG PARERIVMAV GAEIAGLLAD GREGRATIDG
RGVVPEDIAV IVRSHKEAAL VQEGLRGLGI PSVVQSAMSL FATEEAREIC RILEAVAEPS
SETRVRAALA TTILGMSGND IARLLEDERG WEERLEAFRE YHDFWQGRGF MTMFRTLLAR
EGVRERLLPF VDGERRLTNV LHCGEVIHGA AMEGSLGVAP LCAWFGERVN SPPPDEEYQI
RLESDEKAVR IVTVHVSKGL EYPIVFCPFT WGGVRDDDDT AVCHDGYRMV ADFGSDDYKS
RRLKARNEAL AENVRLLYVA LTRARHRCYL VWGKFRYAET SALAYLLHHP ADSRECDIKA
VLGEVMKGIS DEALLKRLDG LKEEGGGAIA VTVDPAPEAA SFRSGPEGAA TPVCPPFGRK
IESDWRVASF TSFAARHRPE EELPDRDQPA TVVADSETAV FEVLPAEGTI FAFPKGSQAG
IVLHAVFENL DFAAATDAKV VSVVAQELAR HGFGEEWRGA VCAMVRNVLD APLDKGDSAF
RLADLAPHSW RAEMEFFFPL RFVGSEQVAA VLRRWGALPD GATLAEVAAR LDFSPVQGMV
RGFMDMVFEH RGKYYLIDWK SNHLGNRVDD YGRENLGREM ERKLYPLQYL LYTVALNLHL
KQRVPGYRYE THFGGALYVF LRGVEPGRPG CGIYHDIPPK GLIDELTSCL VALKEHNDGA
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