Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_1880 |
Symbol | |
ID | 3740282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 2095712 |
End bp | 2096929 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637779171 |
Product | aspartate kinase |
Protein accession | YP_384834 |
Protein GI | 78223087 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0527] Aspartokinases |
TIGRFAM ID | [TIGR00656] aspartate kinase, monofunctional class [TIGR00657] aspartate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000000000266682 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.0000823679 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTCTGG TGGTCCAAAA ATACGGCGGC ACCTCAATGG GATCGATTGA ACGGATCCGC AATGTTGCCA AGAGGGTCGC CAAGACCTAC GACGCGGGCA ACGATATGGT GGTCGTCGTT TCGGCCATGT CCGGCGAAAC CAACAAGCTC GTGGCCCTGG CCAATGAGGT GTGCGAGTTT CCCGATAACC GCGAGTATGA CGTTCTGGTT GCCTCGGGCG AACAGGTATC CATCGCCCTT CTCGCCATGT GTCTCAAATC CATGGGATAC AAAGCAAAAT CCTACCATGG CTGGCAGGTG CCGATCATTA CCGACAGCGT CTTCAGCAAG GCCCGCATTG AAGAGATTCC CGACGCAAAG GTGAGGGCTG ACCTCAAGGA CGGGACTATC GTTGTCGTGG CCGGTTTCCA GGGGATAGAC AAGGACGGCA ACGTTACCAC GTTGGGGCGC GGCGGTTCCG ATACCTCGGC CGTGGCCATG GCTGCCGCCA TGAAGGCCGA TGTCTGCGAG ATCTACACCG ACGTTGACGG TGTCTACACC ACCGACCCCA ACATCTGTGA GGACGCCCGT AAGATCGATA AGATTTCCTA CGACGAGATG CTGGAACTGG CGAGCCTTGG AGCGAAAGTG CTCCAGATTC GTTCAGTCGA ATTTGCCAAG AAATACAATG TGGACATACA TGTCCGCTCA AGTTTCAATG ACAATCAAGG GACTATGGTC ACCAAGGAGG ATAAGGACAT GGAAGCTGTA CTCGTTTCGG GTATCGCCTA CGACAAGAAT GAAGCTAAGA TTGCCGTACT GGGCGTGCCG GACAAACCGG GGATTGCCGC CAAGATTTTG TCGTCCCTTT CCGATGCCAA TATCTCGGTC GATATGATCG TCCAGAACGT GAGTGGTGGC GATCTTACCG ATTTCACTTT TACTGTCACC AAGGCCGACT TCAAAAAGGC ACTTGCCATC ACCAAGGAAA TTGCCACTGA GATCAAGGCA ACGGGCGTGT CGGCCGATGA AAGCATTTCC AAGGTCTCCA TCGTCGGCGT CGGCATGCGG AGCCATGCCG GTGTCGCCAC CAAGATGTTC CAAACCCTTG CAAATGAAGG AATCAATATT CAGATGATTT CCACCTCCGA GATCAAGGTG TCTGTCGTTA TTGACGCCAA GTACACGGAA CTCGCCGTGA GGGTGCTCCA CGAGGCATTC GGCCTTTCCG GCAAATAG
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Protein sequence | MALVVQKYGG TSMGSIERIR NVAKRVAKTY DAGNDMVVVV SAMSGETNKL VALANEVCEF PDNREYDVLV ASGEQVSIAL LAMCLKSMGY KAKSYHGWQV PIITDSVFSK ARIEEIPDAK VRADLKDGTI VVVAGFQGID KDGNVTTLGR GGSDTSAVAM AAAMKADVCE IYTDVDGVYT TDPNICEDAR KIDKISYDEM LELASLGAKV LQIRSVEFAK KYNVDIHVRS SFNDNQGTMV TKEDKDMEAV LVSGIAYDKN EAKIAVLGVP DKPGIAAKIL SSLSDANISV DMIVQNVSGG DLTDFTFTVT KADFKKALAI TKEIATEIKA TGVSADESIS KVSIVGVGMR SHAGVATKMF QTLANEGINI QMISTSEIKV SVVIDAKYTE LAVRVLHEAF GLSGK
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