Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_1875 |
Symbol | |
ID | 3740277 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 2090602 |
End bp | 2091192 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637779166 |
Product | nucleoside-triphosphatase |
Protein accession | YP_384829 |
Protein GI | 78223082 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0127] Xanthosine triphosphate pyrophosphatase |
TIGRFAM ID | [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0000000470293 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.00669651 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACTGACT TGATTGTCGC CACGAGGAAT AAGGGGAAGC TCCTGGAAAT TGGAAAGATC CTAGAAGGAG TTCACTGCAG AATATACTCT CTTGCTGATT TTCCCGATCT TCCAGAGATT GAGGAGGACG GCGTAACGTT TGAACAGAAT GCTATTAAGA AGGCTTCTGC AATAGCGCAA TTAACCGGAC TTCCTGCGCT AGCAGACGAT TCAGGGCTTG TCGTCGATGC TCTCGGTGGG AGGCCGGGCG TTTTTTCTGC CCGCTATGCA GGGACTGGCG CCACTGATGA GACGAATAAC GCAAAGCTCC TTGAAGAGTT ACGGGGAACC CCTCCTGAAA GACGCGGAGC TGCCTTCCAT TGCGTTATAG CTCTCTGTTT GCCTGATGGT TCATGCACCA CCTTCTCGGG AGAACTCAGA GGATCTATCC TTGAAGTTCC CCAAGGGGGT GGTGGGTTTG GATATGATCC CCTGTTCTTT GTGGAGGAAG AAGGTTCGTC CCTCGCAGAG TTGCCTCTGG AAAGAAAAAA TCGTCTCAGC CACCGAGGCA AAGCTTTAGA GTTGCTGAAG GGGAAATTAT CTAAGGCGTG A
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Protein sequence | MTDLIVATRN KGKLLEIGKI LEGVHCRIYS LADFPDLPEI EEDGVTFEQN AIKKASAIAQ LTGLPALADD SGLVVDALGG RPGVFSARYA GTGATDETNN AKLLEELRGT PPERRGAAFH CVIALCLPDG SCTTFSGELR GSILEVPQGG GGFGYDPLFF VEEEGSSLAE LPLERKNRLS HRGKALELLK GKLSKA
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