Gene Gmet_1842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1842 
Symbol 
ID3741519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp2055305 
End bp2056120 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content61% 
IMG OID637779126 
Productdihydroorotate oxidase B, electron transfer subunit 
Protein accessionYP_384796 
Protein GI78223049 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.00505265 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value0.947825 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTTTA AAGCGACAAT CATTTCCAAC CAGGAAGTTT CTCCGGGCTA CTTCCGGATG 
CGGATTACCG CTCACCCGGA ACTGACCGGG GCGCAGCCCG GGCAGTTCGT CATGGTCCGG
GTTCGCGATG CCATCGATCC GCTGCTGCGG CGCCCCTTCG GCATTTTCGA CGTGGGAACC
GTCCCCTCCG AATATCCTGG CTGCAGTTCC GCCACGTACC TTGAAATGCT CTACAAGGTG
GTGGGGAAGG GGACCGAAAC GCTTTCCACC TATCATCACG GCGACCACGT TGACATTATC
GCACCTCTGG GTACCGGTTT TGACCTGGGC GATCCGGAGG AGGAGAAGAT CCTCGTGGGC
GGAGGCGTCG GGATCGCTCC CCTCTATTAC CTGGCAAAAA CCCTGGTTGG GCGTTCCCGG
GTACGGTTCT TCCTTGGCGG ACGCACCAGG GATGACATTC TGTGTGTGAC CGAATTCGAG
AGGCTTGGGG TTGAGACCTA CGTCTCCACC GACGACGGGA CCCTTGGAGA CCGTGGACTC
GTGACTGACG TCATGGAACG GCATGTCCGC GAGGACGGAC GAAAGAAGAC CATTTACGCC
TGCGGCCCTA TGCCGATGCT GAAGGCGGTC GCCGGGATTG CCCGCCAGAC CGGAACCTCC
TGCCAGGTTT CGCTGGAAGC CTACATGGCC TGCGGCATGG GAGCGTGCCT CGGGTGCGTG
GTGAAGGGCA GGGACCATGG CGACGAGACC CCGGATTACC GGTGCGTCTG TAAGGACGGA
CCTGTGTTCG CCTTCGATCA ACTGATGTGG GTATAG
 
Protein sequence
MQFKATIISN QEVSPGYFRM RITAHPELTG AQPGQFVMVR VRDAIDPLLR RPFGIFDVGT 
VPSEYPGCSS ATYLEMLYKV VGKGTETLST YHHGDHVDII APLGTGFDLG DPEEEKILVG
GGVGIAPLYY LAKTLVGRSR VRFFLGGRTR DDILCVTEFE RLGVETYVST DDGTLGDRGL
VTDVMERHVR EDGRKKTIYA CGPMPMLKAV AGIARQTGTS CQVSLEAYMA CGMGACLGCV
VKGRDHGDET PDYRCVCKDG PVFAFDQLMW V