Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_1774 |
Symbol | |
ID | 3741450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 1988706 |
End bp | 1991951 |
Gene Length | 3246 bp |
Protein Length | 1081 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637779059 |
Product | carbamoyl-phosphate synthase large subunit |
Protein accession | YP_384730 |
Protein GI | 78222983 |
COG category | [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism |
COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000157385 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.0854041 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAAAC GTACCGACAT CAAAAAGATT CTCATCATCG GCGCCGGCCC CATCGTCATC GGCCAGGCGT GCGAATTCGA CTACTCCGGC ACCCAGGCGT GCAAGGCGTT GAAGGAAGAA GGGTTTGAGG TGGTGCTGCT GAACAGCAAC CCGGCCACCA TCATGACCGA CCCCGATTTT GCCGACCGAA CCTATGTGGA ACCGGTTACT CCTGACGTAC TGGCCAAGAT CATCGAAAAG GAGCGCCCCG ACGCGGTTCT CCCCACGCTC GGCGGCCAGA CTGCCCTGAA CACCGCTGTG GCCGTGGCCG AGAACGGCAC CCTGGAGAAG TTCGGGGTTG AGTTGATCGG GGCCAAGCTT CCGGCCATCA AGAAGGCCGA GGACCGGACC CTCTTCAAGG AGGCCATGGA GAAGATCGGC CTTTCGGTTC CCCGCTCTGG CCTTGCCCAC AACTACACCG AGGCCATGGA GGTGATCAAG ACGGTCGGCT TTCCGGCCAT TATCCGCCCC TCCTTCACCC TGGGGGGAAC CGGCGGCGGC ATTGCCTACA ACATGGAAGA GTATGAAAAG ATGGCCATGG GGGGCATCGA CGCCTCCCCC ACCGACGAGA TTCTCGTGGA AGAATCGGTC ATCGGCTGGA AGGAGTACGA GCTGGAGGTG ATGCGCGACA CCGCCGACAA CGTGGTGATC ATCTGTTCCA TCGAGAACTT CGACCCCATG GGGGTCCATA CCGGCGACTC CATCACCGTG GCCCCGGCCC AGACCCTCAC CGACAAGGAG TATCAGATCC TTCGCGACGC GGCCCTCAAG ATCATCCGCG AGATCGGGGT CGACACCGGC GGCTCCAATA TCCAGTTCGG CATCAACCCC CGGAACGGCC GCCTGGTAGT CATCGAGATG AATCCGCGGG TTTCCCGTTC CTCGGCCCTG GCCTCCAAGG CCACCGGCTT TCCCATCGCC AAGATTGCGG CAAAGCTGGC CGTGGGCTAC ACCCTGGACG AGATCAGAAA CGACATCACC CGCGAGACCC CGGCATGCTT CGAGCCGACC ATCGACTACG TGGTGACCAA GATCCCGCGC TTCACCTTCG AGAAATTCCC CGCCGCCGAC AGCACCCTCA CCACCCAGAT GAAGTCTGTG GGTGAAGTCA TGGCCATCGG CCGTACCTTC AAGGAGTCGT TCCAGAAGGC CCTCCGTTCT CTGGAGATCG GCTCCGCCGG GTTCGAATCG CGGCTTTTCA CCAACGGCGA CACCCGTCGG GCCCTCAGCG CCAAGGAGCA GCAGCTTGTT CAGGACAAGC TCCGGGTACC CAACTGGGAG CGGCTCTGGT ACCTGGGGGA TGCTTTCCGC TGTGGCATGA GCATCGACGA GATCTTCCAG TTCACCGCCA TAGATCCTTG GTTCCTTCAC AATATCAAGC AGATCATCGA GAAAGAAGAG GATCTGCGGA CGGTCGATTT GGCGGCGGAA ACCAGGGAAA ATCTGGCTGC CATCGTCCGC GAGGCCAAGC AGTACGGCTT TTCCGACAAG ATGCTCGGTC GTTTCTGGGG GAAGAACGAC GAGGAGATCC GTCAACTGCG CCTTTCTCTC GGCGTGAAGC CGGTGTTCAA GCGGGTTGAT ACCTGCGCCG CCGAGTTCGT GGCCTATACC CCGTACCTCT ACTCCACCTA CGAGGAGGAG TGCGAGGCCG AGGTGACCGA CCGGAAGAAG ATCATGATTC TCGGCGGCGG TCCCAACCGG ATCGGACAGG GGATTGAGTT CGACTACTGC TGCGTCCACG GGGTTTTCGC CCTGGGAGAA GACGGCTACG AGACCATCAT GGTCAACTGC AACCCGGAAA CGGTCTCCAC CGACTACGAC ACCTCCGACC GCCTCTACTT CGAGCCCCTC ACCTACGAGG ACGTCCTTTC CATAGTCGAT CTGGAAAAGC CCCAGGGGGT CATCGTCCAG TTCGGCGGCC AGACTCCGCT CAAGCTGTCT GTTGCCCTGG AGAAGGCCGG GGTTCCCATT ATCGGCACCT CTCCCGACGC CATCGACCGG GCCGAGGACC GGGAGCGGTT CCAAGAGATG CTCCACAAGC TGAACCTGCT GCAGCCCGAG AACGGTACCG CCCGCTCCTT TGAGGAGGCG GAAGAGGTGG CCAACCGGAT CGGCTACCCC GTGGTGGTGC GTCCCTCCTA TGTTCTTGGC GGCAGGGCCA TGGAGATCGT CTACGACGTG GAGAATCTGC GCCGTTACAT GACCACCGCC GTCCAGGCGT CGCCGGAGCA TCCGATCCTC ATCGACAAGT TCCTGGACAA GGCCATCGAG ATCGACGTAG ACGCCCTCTG TGACGGGACC GAGGTGGTTA TCGGCGGAAT CATGGAGCAC ATCGAGGAGG CCGGCATCCA CTCGGGCGAC TCAGCCTGCT GTCTGCCGCC CCATTCAATT TCGCCGGAAC TGGTGGAGGA GATCAGGCGC CAGACCACCG TCATGGCACT GGAGCTGAAC GTCAAGGGGC TCATGAACGT TCAGTATGCC ATTAAGGACG GGACCATCTA CATCCTTGAG GTGAACCCCC GGGCCTCCCG GACAGCACCT TTCGTCTCCA AGGCCACGGG GCGCCCCTTG GCCAAGATCG CGGCCCGGAT CATGGCCGGC AAGTCCCTGA AGGAGCTGGG CGTTGCCGGC GACATCGTGC CGAAGCACAT GTCGGTCAAG GAAGCGGTTT TCCCCTTCGT GAAGTTCCCC GGTGTTGACA CGATCCTCGG ACCGGAGATG AAGTCTACCG GTGAGGTCAT GGGGATCGGT TCCGATTTCG CCACCGCCTT CGCCAAGGCG CAACTCGGCG CCAACGTGAA ACTGCCCCGA TCGGGGAAGG TTTTCATCAG CCTCCATGAC GCCGACAAGA AACATATTGT CGACTCAGCG AAAAAGCTCT ATAATGCCGG TTTTAGATTG GTTGCCACGC GGGGTACCGC CGCCTACCTT AAGGAGAAGG GTGTGGAGGT GGAGGTGATC AACAAGGTGC TCGAAGGACG GCCTCACATC GTCGACGCCA TCAAGAGTGG GCAGGTCTGC ATGGTGCTCA ACACCACCCA GGGTGCTCAG GCCGTGGCCG ATTCCTTCTC TATCCGGCGT GAGTCTCTCA TGCACAACGT GGCTTATTTC ACCACCGTTG CCGGAGCAAA TGCGGCTGCA GAAGGGATCA TCGCCATGAT CAACGGCGAA CTTGATGTGA AACCGTTGCA GGAATACCTG GCCTGA
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Protein sequence | MPKRTDIKKI LIIGAGPIVI GQACEFDYSG TQACKALKEE GFEVVLLNSN PATIMTDPDF ADRTYVEPVT PDVLAKIIEK ERPDAVLPTL GGQTALNTAV AVAENGTLEK FGVELIGAKL PAIKKAEDRT LFKEAMEKIG LSVPRSGLAH NYTEAMEVIK TVGFPAIIRP SFTLGGTGGG IAYNMEEYEK MAMGGIDASP TDEILVEESV IGWKEYELEV MRDTADNVVI ICSIENFDPM GVHTGDSITV APAQTLTDKE YQILRDAALK IIREIGVDTG GSNIQFGINP RNGRLVVIEM NPRVSRSSAL ASKATGFPIA KIAAKLAVGY TLDEIRNDIT RETPACFEPT IDYVVTKIPR FTFEKFPAAD STLTTQMKSV GEVMAIGRTF KESFQKALRS LEIGSAGFES RLFTNGDTRR ALSAKEQQLV QDKLRVPNWE RLWYLGDAFR CGMSIDEIFQ FTAIDPWFLH NIKQIIEKEE DLRTVDLAAE TRENLAAIVR EAKQYGFSDK MLGRFWGKND EEIRQLRLSL GVKPVFKRVD TCAAEFVAYT PYLYSTYEEE CEAEVTDRKK IMILGGGPNR IGQGIEFDYC CVHGVFALGE DGYETIMVNC NPETVSTDYD TSDRLYFEPL TYEDVLSIVD LEKPQGVIVQ FGGQTPLKLS VALEKAGVPI IGTSPDAIDR AEDRERFQEM LHKLNLLQPE NGTARSFEEA EEVANRIGYP VVVRPSYVLG GRAMEIVYDV ENLRRYMTTA VQASPEHPIL IDKFLDKAIE IDVDALCDGT EVVIGGIMEH IEEAGIHSGD SACCLPPHSI SPELVEEIRR QTTVMALELN VKGLMNVQYA IKDGTIYILE VNPRASRTAP FVSKATGRPL AKIAARIMAG KSLKELGVAG DIVPKHMSVK EAVFPFVKFP GVDTILGPEM KSTGEVMGIG SDFATAFAKA QLGANVKLPR SGKVFISLHD ADKKHIVDSA KKLYNAGFRL VATRGTAAYL KEKGVEVEVI NKVLEGRPHI VDAIKSGQVC MVLNTTQGAQ AVADSFSIRR ESLMHNVAYF TTVAGANAAA EGIIAMINGE LDVKPLQEYL A
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