| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1750 |
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| Symbol | |
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| ID | 3741426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 1965564 |
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| End bp | 1966469 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637779035 |
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| Product | signal peptide peptidase A |
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| Protein accession | YP_384706 |
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| Protein GI | 78222959 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 56 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 0.137961 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGAAAA ACCATGTAGT GATCGGCGTG ATCATCGTGG CTGCCCTTGC CCTTCTTTTC
ACCCTTTCGA TCCAGATTGC GCGGCTGATT TTGGGCGATG GACCCATGGT GAGTTCCGGC
GAAGGGGTCG GGTATGTGGA GGTCAAGGGA CCTATCCTGG AATCCGAGGA AATCGTCAAA
CAACTCAGCG AAATGCGGAA AAAGACCAAT GTGAAAGCGG TCGTCCTGCG GATTGAGTCC
CCCGGCGGGG TCATCGGTCC GTCCCAGGAG ATTTATGAAG CGGTGAAGAA GCTCGCCAAG
ACCAAGAAGG TCGTGGTTTC CATGGGGAGC GTGGCCGCAT CCGGAGGGTA CCATATTGCC
ATCCCCGCCG CGGTCATCTA TGCCAATCCC GGCACCATAA CCGGGAGTAT CGGCGTTTTG
ATGAAACTTG CCAATGTCGA GGGTTTGATG GACAAGGTGG GGATGAAGGC CTTTACCCTC
AAGAGCGGTA AGTTCAAGGA CGCAGGCTCA CCGGTACGTG CCTTGACCGA TGAGGACAGG
GCGCTGCTTC AGGGAGTAAT CGACAATCTT CACACCCAGT TTGTGAAGGC CGTCGCCGAG
GCGCGGAAAC TCCCGGTCGA AGAGGTCAGG CGTCTCGCGG ACGGGCGGGT GTATACCGGC
GAGCAGGCTG TGTCGCTCAA ACTCGTTGAC CGGCTCGGGA CCCTTGAGGA TGCCGTTGAG
GAGGCGGGTC GCCTGGCAGG AATCAAGGGT GAGCCGACAT TGCTGATGCC GCCGAAAAAA
CGGAAGCATC TCAGGGATTA TCTGCTGGAA GAAGCATCGG GCTTCTTTCG GGAGATAGTG
CGGCGCGAGG GGGGATTCAG CGTCAACTAC GAGCTTGATC CGGCCGTGGG CAATGGAGGC
CGTTGA
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| Protein sequence | MKKNHVVIGV IIVAALALLF TLSIQIARLI LGDGPMVSSG EGVGYVEVKG PILESEEIVK
QLSEMRKKTN VKAVVLRIES PGGVIGPSQE IYEAVKKLAK TKKVVVSMGS VAASGGYHIA
IPAAVIYANP GTITGSIGVL MKLANVEGLM DKVGMKAFTL KSGKFKDAGS PVRALTDEDR
ALLQGVIDNL HTQFVKAVAE ARKLPVEEVR RLADGRVYTG EQAVSLKLVD RLGTLEDAVE
EAGRLAGIKG EPTLLMPPKK RKHLRDYLLE EASGFFREIV RREGGFSVNY ELDPAVGNGG
R
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