Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_1651 |
Symbol | |
ID | 3740501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 1854460 |
End bp | 1855683 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637778936 |
Product | secretion protein HlyD |
Protein accession | YP_384607 |
Protein GI | 78222860 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.986785 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCTAT CTCTCTCGCC CCGCGACCCG TCGAGAAGCG GCATCCTGTC CCGTCGCGTT CGCCGACTGG TCGTGCAGGG GGCAGCTTAT TCTCTCATTG TCACACTTGC CGCCTGCGCC AAGAAAGAGC AGAAACCTGC TGCCAAGCCG CCGGTCCCGG TAGCGATCGC CACGGTCGAG CGAAAGACCG TCCCGGTCCA GATCAAGGCC ATCGGCAACG TGGAGCCCTA CGCTACCGTG GCCGTCAAGG CTCAGGTGAA CGGCGAGGTG CTGAAGGTCC ATTTCACCGA GGGACAGGAC GTGAAACGGG GTGACCTCCT TTTCGCCATT GACCCGCGCA CCTATCAGGC AGCAGTGAAG AAAGCCGAAG CCAATCTTTC CCGTAACCTC GTCCAGGCAC GGAACGCCCG GCAGGACGCG GAGCGCTACG CCCAACTGGT GAAGGAGGGC ATCGTGACTT CGGAGCAGTA CGAGCAGTAC CGGACCAGGG CCGAGGCCTT TGCCGCCGAT GTGTCCGCCG ACCGGGCCGC CGTCGAGAAC GCGAAGGTGG AGCTTTCCTA CTGCTTCATC CGCTCCCCCT TGACCGGCCG CACCGGGAAT CTGGCGGTCC ATGCGGGGAA CATCGTAAAG GCCAATGAGA ACCCCCCCCT GGTCACCATC AACCAGATTA CGCCGGTCTA CGTGGCGTTT TCCATCCCCG AAAAGGACCT CGCCGAGGTC AAGCGCCGCA TGGCTGCAGG AAAGCTGGCG GTGGAGGCGA CCATTCCCAA CGATGCCGGT CCCGCTGAGC AGGGGATGAT CTCCTTCCTC GACAACACGG TTGACGTGGC CACCGGCACC ATCAAACTCA AGGGGACCTT CGAGAACAGG GCACGTCGCC TCTGGCCCGG GCAGTTCGCC AACGTGGTTG TGACCCTCGC GGCCAGGCCC AATGCGATTG TGGTCCCGGC CCAGGCGATT CAGACCGGCC AGAGCGGTCC CTATGTCTTT GTGGTAAAGG CTGACTCTTC GGTAGAAATC CGGCCGGTGA CGCCGGGCAT TGCCTACGAA GGGGTCACCA TTATCGAGCA GGGGCTCGCG CCCGGTGAAA GGGTTGTGAC CGACGGCCAG ATGAGGCTCA CGCCCAAGGC CAGGGTGACG GAAAAACCGG GACCGGGGAC CAGGGACCAA GGGCCGGCAA ACCCCCGGCA AGCTTCTGGC CAGCCCAAGG GCCAGCAACC ATGA
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Protein sequence | MNLSLSPRDP SRSGILSRRV RRLVVQGAAY SLIVTLAACA KKEQKPAAKP PVPVAIATVE RKTVPVQIKA IGNVEPYATV AVKAQVNGEV LKVHFTEGQD VKRGDLLFAI DPRTYQAAVK KAEANLSRNL VQARNARQDA ERYAQLVKEG IVTSEQYEQY RTRAEAFAAD VSADRAAVEN AKVELSYCFI RSPLTGRTGN LAVHAGNIVK ANENPPLVTI NQITPVYVAF SIPEKDLAEV KRRMAAGKLA VEATIPNDAG PAEQGMISFL DNTVDVATGT IKLKGTFENR ARRLWPGQFA NVVVTLAARP NAIVVPAQAI QTGQSGPYVF VVKADSSVEI RPVTPGIAYE GVTIIEQGLA PGERVVTDGQ MRLTPKARVT EKPGPGTRDQ GPANPRQASG QPKGQQP
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