| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1626 |
|---|
| Symbol | |
|---|
| ID | 3739365 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 1823280 |
|---|
| End bp | 1824482 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637778910 |
|---|
| Product | GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase |
|---|
| Protein accession | YP_384582 |
|---|
| Protein GI | 78222835 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II |
|---|
| TIGRFAM ID | [TIGR00505] GTP cyclohydrolase II
[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.00000177165 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGTTG CTAGAATAGA AGAAGCCATA GAGGACATCA AGCAGGGGAA AATGATCATT
CTCGTGGATG ATGAGGACCG CGAGAACGAG GGTGATCTTA CCATGGCCGC CGAGATGATC
ACCCCTGAAG CGATCAACTA CATGGCAAAG TATGGCCGTG GTCTGATCTG TCTCACCATG
ACCTCGGAGC GGTGCGATTA CCTCAGGTTG CCGCTCATGG TGTCCGACAA TACCTCGTCC
TTCGGTACCG CCTTTACCGT CTCCATTGAG GCAAAACGGG GAGTGACCAC CGGCATCTCC
GCCGCTGACC GTGCCCATAC AGTTCTCACA GCCGTGGCCG ATGCCACGAA ACCGGAGGAC
CTTGCCCGGC CCGGCCACAT ATTCCCGCTG CGGGCCCGTA ACGGTGGTGT CCTCGTCCGG
GCGGGGCAGA CCGAAGGGTC AGTGGATCTG GCCCGTCTTG CAGGCCTCAA GCCGGCTGGC
GTCATCTGTG AGATCATGAA CGATGACGGC ACCATGGCCC GGATGCCGCA ACTGAAGAAA
TTCGCCAAGG AGCACGGGAT CAAGATCTGC ACTATTGCTG ACCTAGTCGC CTACCGGCTC
AAGCACGAGT CCTTGGTCCG CCGGGCTGCC GATGTGGAAC TCCCCACCGA AGCTGGTGAG
TTCCGGGCCA TCGCCTTCGA AAACGATGTG GACAAGCTGG AGCACCTGGC ACTCGTGAAG
GGAGAGATCA GTGGGGATGA GCCAATACTC GTCCGGGTTC ATTCCGAGTG CATGACCGGC
GATGTTTTCG GGAGTCTCCG GTGCGATTGC GGCGGCCAGC TTCACCGGGC CATGGAGATG
ATTGAGGCCG AGGGGAAAGG GGCTATCCTC TATATGCGCC AGGAAGGACG GGGAATCGGC
TTGTTCAACA AGCTCAAGGC CTATGCCCTT CAGGACCAGG GGAAGGATAC CGTTGAGGCT
AACCTGGAGC TCGGCTTCAA GCCCGACATG CGCGACTACG GCATCGGCGC CCAGATCCTC
GTGGACCTCG GAATCAAGAA CATCCGCCTC ATGACCAACA ACCCCCGGAA GCTGATTGGC
CTCCAGGGAT ACGGAATCAA TATAGTGGAA CGGGTACCCA TCGAGATTCC CGCCACGGGG
AGCAATGCCG GCTACCTGAA GACAAAACGC GAGAAGCTGG GACACCTGCT GGAAAATATC
TGA
|
|---|
| Protein sequence | MTVARIEEAI EDIKQGKMII LVDDEDRENE GDLTMAAEMI TPEAINYMAK YGRGLICLTM
TSERCDYLRL PLMVSDNTSS FGTAFTVSIE AKRGVTTGIS AADRAHTVLT AVADATKPED
LARPGHIFPL RARNGGVLVR AGQTEGSVDL ARLAGLKPAG VICEIMNDDG TMARMPQLKK
FAKEHGIKIC TIADLVAYRL KHESLVRRAA DVELPTEAGE FRAIAFENDV DKLEHLALVK
GEISGDEPIL VRVHSECMTG DVFGSLRCDC GGQLHRAMEM IEAEGKGAIL YMRQEGRGIG
LFNKLKAYAL QDQGKDTVEA NLELGFKPDM RDYGIGAQIL VDLGIKNIRL MTNNPRKLIG
LQGYGINIVE RVPIEIPATG SNAGYLKTKR EKLGHLLENI
|
|---|
| |