Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_1506 |
Symbol | |
ID | 3741637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 1706070 |
End bp | 1708259 |
Gene Length | 2190 bp |
Protein Length | 729 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637778792 |
Product | tetratricopeptide TPR_4 |
Protein accession | YP_384465 |
Protein GI | 78222718 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCATC GTTCGGTACG TGGAATCTGC GCCACCCTCG GCGTCCTGCT TGTTATCGGC TGTAGCGGCC CCGACGCCAA GAAAGCCAAG TTCTACGCCA AGGGGAAGGA GCTCTATGAC AAGGGAGACT ATGCCAAGGC GGCGCTCGAG TTCAAGAATG CCATCCAGAT TGATCCCAAA TACGCCGAGG CCTACCACAT GCTCGGCCTG GTGGAGATGA AGAAGGGGAA CATCAAGGGT GCCTTCGGCA ACTTCACCAA GGCGGTGGAG TTGAATCCAC AGCATCAGGA GGCACGGCTC CAGCTGGGCC GCATCTACCT TGGAGCCGGC GCTCCCGATG AGGCCATGAA GGAGGCCGTG GAGGTTCTGA AGATCAACCC CGCCAGCGAA GACGCCCAAC TCCTGAAAGG GGCGGTCCTC ATCGCCAGAA AGGAGAAGGG TAAGGCCCGC GAATTACTGG AAGGCCTTGT GGCAAAGGGA GTGAAGAAGC CTGATGCCTA CTCGCTCCTG GCTTCGATTC ACGCATTGGA CGGGAACGCA AAGGACGCCG AGGCGATTCT CCGCAAGGGG CTCGCGATAA ATCCTTCGTC TTCTGATCTC CATCTGACCC TTGCGGGTCT CTGTGTCGGG ACCGGCCGGA CCGACGAGGC GATATCGCTG CTCCAGCGGG TTGTTTCACT GGAACCCGGC AGGACAGACC ACCGTTTGAA GCTCGCAGCA CTCTGCTGGG ACACGGGGAA GGTTGCCGAA GCGCGTAAGG CCCTGACCGA TCTGGTTGCG ATTGCTCCTG AAAAAGAGGA AAACCGGCTT CAGGCCGCGG GATTCCTCGC CGGCAAGGGG GAGGCCGATG AGGCGGAAAA GCTTCTGAAA GAGGGGATTG CCGGAAAAGG GAAGAACTAC AAGCTCCGCT TTGCCCTGGC GGACCTTTAC CTCAATACCG GCAAGGGCGA CCAGGCCGTT ACGCTCCTCA CCGAAACGGC AGGCCTCGAC AAAGCCTCCC GGCAGGAATC GCTCCAGGCG AAAAATGCCT TGGCCCAAAT CGCCCTTGAT CGTAACCGGG TTGACGAAGC CGTAAAACTG GTAACTGAAG TGCTGAAAGA AAGTCCGAAG AATACGGACG CACGGTTTCT CAAGGGAAAC ATTCACATGA TGAAGGGGGA GGGTGCCCAA GCCGTTGCTG AATATCGCAC TGTGGTGACC GACAATCCCC AGTCCGTTCC TGGCTTTATC CGTCTCGCCG AGGCCCATCT CCTTAACAGA GAGAAGAATC TGGCCTTCGA CAACCTGCAG AATGCCCTGA AGATCGATCC CGAAAACCGC GATGCCCTTG TGGCCCTGGC GCGGTATCAC GTCATGCAGA AGGATATGAA AAACGCCGAG GCGGCCCTCC GCAAAGTCCT TGCCAAGAGC CCCAACGATC TGGAAGCGAA GGCGGAGCTT GGCGATCTTT TTCTGGCCGC CGGCGACCTG AAGCGGGCCG AGGCCGAATA CGGCGAACTT AAACGGAAGG CTCCGGGCCT TCCGGTCGGC TACGTCAAGA TGGGAGACAT TTACCTGCAC CGGGGCAAGT CCGACAAGGC CCTGGCAGAA CTGGAGCAGG CGGTGCGGCT CAATCCGTCG TCGGAACTCC TCGCCGGCTC CCTTGCGCGG CTCTATACAC GGCTTGGCAA ATTCGATAAG GCGGAATTCC TCCTCGATCA ACGTCTGAAG CAAAATCCCA ACGACGCTGC TTCCTACACC CTGCTGGGCC AGATGAATGT TGCCCGGAAT CAGTATGGCA AGGCCCGGCA GGCCTACGAA AAGGCCCTGT CACTTAATGG TTCCAACTGG AGCGCCGCCA ATGATCTGGC GTTCCTCCTG GCAGAAACCG GTTCGGGCGC CGATCTCGAC CGGGCGCTTA CGCTCATCGA GAAGGTTAAA CAGAGCCGTC CCGACGATCC CCGGGTCCTC GATACCGTCG GCTGGATCTA CTACAAGAAG GGGAATGCCG GAAAGGCCGT CGAAATTCTG TCGCAGGTGC ATCGCAAGAC CGGCGACAGC CCGGTTATTG ACTATCACCT CGGCATGGCC TCCTACAAGG CCGGCGACAA GGCCCGTGCC AAAGAGCTCC TGACGAAGGC AATGACGAGC AAGAGCGGAT TTGCCGGGCG GGAAGAGGCG GTCAAGACGC TCGGGATCAT CAAGGGGTGA
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Protein sequence | MNHRSVRGIC ATLGVLLVIG CSGPDAKKAK FYAKGKELYD KGDYAKAALE FKNAIQIDPK YAEAYHMLGL VEMKKGNIKG AFGNFTKAVE LNPQHQEARL QLGRIYLGAG APDEAMKEAV EVLKINPASE DAQLLKGAVL IARKEKGKAR ELLEGLVAKG VKKPDAYSLL ASIHALDGNA KDAEAILRKG LAINPSSSDL HLTLAGLCVG TGRTDEAISL LQRVVSLEPG RTDHRLKLAA LCWDTGKVAE ARKALTDLVA IAPEKEENRL QAAGFLAGKG EADEAEKLLK EGIAGKGKNY KLRFALADLY LNTGKGDQAV TLLTETAGLD KASRQESLQA KNALAQIALD RNRVDEAVKL VTEVLKESPK NTDARFLKGN IHMMKGEGAQ AVAEYRTVVT DNPQSVPGFI RLAEAHLLNR EKNLAFDNLQ NALKIDPENR DALVALARYH VMQKDMKNAE AALRKVLAKS PNDLEAKAEL GDLFLAAGDL KRAEAEYGEL KRKAPGLPVG YVKMGDIYLH RGKSDKALAE LEQAVRLNPS SELLAGSLAR LYTRLGKFDK AEFLLDQRLK QNPNDAASYT LLGQMNVARN QYGKARQAYE KALSLNGSNW SAANDLAFLL AETGSGADLD RALTLIEKVK QSRPDDPRVL DTVGWIYYKK GNAGKAVEIL SQVHRKTGDS PVIDYHLGMA SYKAGDKARA KELLTKAMTS KSGFAGREEA VKTLGIIKG
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