Gene Gmet_1472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1472 
Symbol 
ID3740493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp1654569 
End bp1655783 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content55% 
IMG OID637778758 
Productserine phosphatase 
Protein accessionYP_384431 
Protein GI78222684 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2208] Serine phosphatase RsbU, regulator of sigma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGATT ATTGTGAGAG CAGTGTACCG ATTTTGCGGG ACATCGCGGT GCCGAATGCC 
GGAGTCTCCC CGAACGTAAC GGTGCGCGAA GTTGTGGAAA TTTTTCAGGG CGATGCAACG
CTGCTCACGC TGCCGATTAT TGACGAAGGT GAGTTCCTGG GAATCATCAA CCGCAAGGTT
CTGATTTTCA AACACCTCGG CCGACCTTTT ACCATGGAAC TCTACGGGAA GAAACCGATC
AGGGAACTTC TTGATGAGTG TCCGTTTACC ATGAATGCGG GAGTCGACGT AAACAGCGCC
CTCGAACGGC TTATCGAGGT GGATCCGAGA CTGGAAACCG ATTCGTTTCC GGTCATGGAT
GGAAAATGCT GCATCGGCAT CGCCTCGGTG GCGGAACTCA TGATGAGCAT ATCCAGAACC
CAGGCTGCTC TCTTGCAGAC CCTCAATCGG CTTACCGCCC GCATAAGAGC GGAGGTCGAC
AATGCGAGGA GTATCCAGCA GGATCTCCTT CCCCTCGATT CAGCGCGGTT CAACAACATT
GCAATCTCTG CAAGCATGAC CACATCCACA GAGATCGGAG GAGATTTTTA CGATTACATC
CGACTCCCCG ATTCAACGGT CTGCATCGTC ATGGGTGATG TGAGCGGCCA CGGAATCCAG
GCCGGGATGG TAACCACCGC GGCCAAGGCG AGCCTTCACA CCCTTATCGC AGCAGGCGCC
ACCACGCCGG CTCGGCTCTT GTCCGGCATG AACAACGCCA TTCTGGCCAC TGCCCGTCAA
AACCTTCTCA TGACGTGCGT CGTTATCAGC ATAAATCAGC AGCAGCGGAT AGCCACCATC
GCAAATGCCG GTCATACCTT TCCCTATCTT TACCGCACAA TTCCTACGTA CATGGAGCGC
ATCGAGGTGG TTTCCGGGTT TCCCCTCGGA TTTGAACGCG ACGGAGGCTA CACGGAACTG
ACCATTCCCT TCCGTGAGGG AGACAGACTC ATTGTCTATA CCGATGGGAT AGTGGAAGCC
ACCGATAGCG CCGGCCGCCA GTTCGGATAT GAACGGTTCG AGGCTGTTTT TCTCGAACAT
CGGGAACTCT CGTCCGACCA GCTGAAAGAG CAGCTCTTCA CGGACATTCA CTCGTTTGCC
GCCAGCGAAG CCCTCGATGA CGATGTCGCA CTCCTGATCG CCTCGTTCGA CGGTTGTGCC
CCTGAGGTAC CATGA
 
Protein sequence
MTDYCESSVP ILRDIAVPNA GVSPNVTVRE VVEIFQGDAT LLTLPIIDEG EFLGIINRKV 
LIFKHLGRPF TMELYGKKPI RELLDECPFT MNAGVDVNSA LERLIEVDPR LETDSFPVMD
GKCCIGIASV AELMMSISRT QAALLQTLNR LTARIRAEVD NARSIQQDLL PLDSARFNNI
AISASMTTST EIGGDFYDYI RLPDSTVCIV MGDVSGHGIQ AGMVTTAAKA SLHTLIAAGA
TTPARLLSGM NNAILATARQ NLLMTCVVIS INQQQRIATI ANAGHTFPYL YRTIPTYMER
IEVVSGFPLG FERDGGYTEL TIPFREGDRL IVYTDGIVEA TDSAGRQFGY ERFEAVFLEH
RELSSDQLKE QLFTDIHSFA ASEALDDDVA LLIASFDGCA PEVP