| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1444 |
|---|
| Symbol | |
|---|
| ID | 3739087 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 1613644 |
|---|
| End bp | 1614402 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637778730 |
|---|
| Product | polysaccharide export protein |
|---|
| Protein accession | YP_384403 |
|---|
| Protein GI | 78222656 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 66 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 66 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACCG AGCCTGCCGA AAAAGCCGTC GCTGCTGTAG CAACGGAGAA TCCCGGTACT
ACTGAAAACC GGCAGCCTGT CGTTGCGGAA TCGCCAGCGA AGACCGTGGC TGATGATACT
ACGATTCCGG TTCAGGAGCA GGGCGCCATT GGTACCAGTG TTGCCGATCA AGTGCCTGCG
ACTGGTGAGA TGCCGGCGAC TAAGGAAGTG CCTGCTCCCA ATCCCGTGGT GCTTGCCGGG
GTGGATCAGC CCACGTCGGT TCCCCCGCAG GCTGGCGATG CCTATGTCAT CGGTGCCGGC
GATGTTCTCG ATATCGCGGT CTGGCGCGAC GAGAGCCTGA CCAAGACGGT GGTGGTGCTT
CCCGACGGGA CCATTTCGTT TCCCCTTATC GGTGTGGTCA AGGCGGGTGG GAAGACCGTG
GAGCAACTCA AGGATGAGAT CAGGACGCGC CTTTCGAGCT ACTTTTCCGA CCTGACCCTC
TCCCTTGAGG TGCGGCAGGC CAACAGCATG ATGATCTTTG TGGTGGGAAA GGTGAATTCT
CCCGGGCGTC ATCCGATCAG CTCGCCTGTG AACGTGTTAC AGGCCCTGGC CATGGCGGGC
GGGGTAAATC CCTTTGCCAA GAAGGATGAC ATCAAGATTT TCCGCCAGGA CGAGGGGAAA
ACCGTCATCT TTTCCTTTGC CTACAGCGAG GTGTCCCGGG GTAACCGGCT GGAAGAGAAT
ATTGTCCTGA GGCGCGGTGA CCTGATCGTC GTCCCCTGA
|
|---|
| Protein sequence | MATEPAEKAV AAVATENPGT TENRQPVVAE SPAKTVADDT TIPVQEQGAI GTSVADQVPA
TGEMPATKEV PAPNPVVLAG VDQPTSVPPQ AGDAYVIGAG DVLDIAVWRD ESLTKTVVVL
PDGTISFPLI GVVKAGGKTV EQLKDEIRTR LSSYFSDLTL SLEVRQANSM MIFVVGKVNS
PGRHPISSPV NVLQALAMAG GVNPFAKKDD IKIFRQDEGK TVIFSFAYSE VSRGNRLEEN
IVLRRGDLIV VP
|
|---|
| |