Gene Gmet_1439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1439 
Symbol 
ID3739082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp1608980 
End bp1609585 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content62% 
IMG OID637778725 
ProductSOS-response transcriptional repressor, LexA 
Protein accessionYP_384398 
Protein GI78222651 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID[TIGR00498] SOS regulatory protein LexA 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGAAC TCACCCCTCG CCAGAACGAA GTCCTCCGAT TTCTCGAAGG CTACCTCACC 
CAATACGGCT ATCCCCCAAC CATGAGGGAC ATTGCCGCCC ATCTGCGGAT AAGTGGCACC
CTTGGGGTAT CGAAACACCT CACCGCCTTG GAACGCAAAG GGTACATCCG CAGGGACCCT
GGCAACTCCC GCGGCATTTC CCTCGTGGGC CACGGATCAA AATCGGCATC GCTCCCGATC
GCTGGCGTGG TGCGGGCCGG CATGCTCCAG CCGGCCATCG AGGATATCGA GGGGTATCTG
GCCATCGACC AGGCCCAGCT CAAGGGGGGA AAGTTCTTCC TGCGGGTGAA AGGGGACTCC
ATGGTGAACG CCGCCATCCT CGACGGCGAC CTGGCCCTCA TCCGTCCGCA GCCCACTGCG
GAGAATAACG ACATCGTCGT CGCCATGGTC GACGGCGAGG CGACCCTCAA GGCCTTTTAC
CGGGAGCGGG GACAGATTCG CCTCCAGCCC CGCAACCCGA ACATGGAGCC GATCATCATC
CGGGAAGGGG AGGGTGAGGT CGCGATCGTC GGCAAGGTGG TCGGGATCTT CCGGACCCTG
GAATAA
 
Protein sequence
MEELTPRQNE VLRFLEGYLT QYGYPPTMRD IAAHLRISGT LGVSKHLTAL ERKGYIRRDP 
GNSRGISLVG HGSKSASLPI AGVVRAGMLQ PAIEDIEGYL AIDQAQLKGG KFFLRVKGDS
MVNAAILDGD LALIRPQPTA ENNDIVVAMV DGEATLKAFY RERGQIRLQP RNPNMEPIII
REGEGEVAIV GKVVGIFRTL E