Gene Gmet_1378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1378 
Symbol 
ID3740642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp1541771 
End bp1542430 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content55% 
IMG OID637778660 
Productresponse regulator receiver domain-containing protein 
Protein accessionYP_384337 
Protein GI78222590 
COG category[T] Signal transduction mechanisms 
COG ID[COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.321431 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.0110306 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGTCA CCGCCTTGCA ACAGATGACG GTGCTCTTTG TGGACGACGA GGAGATTGCA 
CGGGAGCAGA TGAAGATGGT CCTGAGCAGT TTCTGCAAAA ACACAATCTG TGTAGGTAGC
GCCGACCAGG CCCTGGCCGC GCTGCAGGAG CATCACCCGG ATATAGTGCT CACCGACATC
CGCATGCCCG GCTTGTCAGG CATAGAGCTC CTCAATGCCG TAAAGCAGAA GGATGCGTCG
GTCGCCGTCG TCATAGTATC TGCCCATTCT GAGTCGGAAT ACCTGCTGGA TGCGTTTCGC
TACAAGGCGG ACGGCTACCT TCTGAAACCG TTCAACTTCC ACGAAATGCT CGAACTCCTG
TCCGACATAG CCACCCAGAA GGAAGCCGCC AGTAGTGAGC GGAAACAGGG GCCTGACAAT
AGGGATTTCC TCTTGAAAAT TCTCGATACA CTCGGCGGAA GACGGGCCGA GATCATGGAG
TACGTCATCA ATCACCTCGA TGCCGACAAC CTGTTCCATG GCACCTATGA CGAGGTGGCT
GAGGCACTCA GCGCCAGCAA GCCGACCGTC GTAGCGACGT TTCAGATTAT GCTGGAAAAG
AACGTGCTGA CCCGGCTCAA GTATGGAACA TACCGGATGA ACGTGGATGC TACTATCTGA
 
Protein sequence
MNVTALQQMT VLFVDDEEIA REQMKMVLSS FCKNTICVGS ADQALAALQE HHPDIVLTDI 
RMPGLSGIEL LNAVKQKDAS VAVVIVSAHS ESEYLLDAFR YKADGYLLKP FNFHEMLELL
SDIATQKEAA SSERKQGPDN RDFLLKILDT LGGRRAEIME YVINHLDADN LFHGTYDEVA
EALSASKPTV VATFQIMLEK NVLTRLKYGT YRMNVDATI