| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1359 |
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| Symbol | |
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| ID | 3738695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 1521978 |
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| End bp | 1524200 |
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| Gene Length | 2223 bp |
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| Protein Length | 740 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637778641 |
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| Product | isocitrate dehydrogenase NADP-dependent, monomeric type |
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| Protein accession | YP_384318 |
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| Protein GI | 78222571 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
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| TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000634164 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 8.074690000000001e-18 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGACAC ACAAGATTAT TTGGACAGAC ATTGACGAAG CACCCGCATT GGCAACATAT
TCCTTGCTGC CGATCATCCA GAAGTTTACT GCGGGGACAG GTGTTGAGGT TGAGACACGG
GACATTTCTC TTGCTGGCCG GATTCTTGCC ACTTTCCCGG AAAACCTGAC TGAAGCTCAA
AAGGTTCCTG ATTATCTGAC TCAGTTGGGG GATCTTACCC ATAACCCCGA AGCAAATATC
ATTAAGCTCC CAAACATCAG TGCTTCCGTT CCGCAGCTCA AAGAGGCGAT CAAAGAGTTG
CAGTCCCAAG GGTACAATGT ACCGGATTAC CCTGAAGACC CGAAGAATGA CGCTGAGAAA
GAGATAAAGG AGCGCTATGC TAAAGTGCTC GGAAGCGCCG TTAACCCAGT TCTTCGTGAA
GGGAACTCGG ACCGTCGCGC ACCGGTTTCC GTCAAAAACT TCTCCAAGAA GCATCCCCAT
AAACTGGGTG CATGGACCTC GGATTCCAAG GCTGAAGTTG CCCACATGAC CACCGGTGAC
TTTTATGGCA ATGAAAAATC CATTGTCATG GAGAATGGCG GTGGTTTCAG GATTGAGTTG
GTGGGTGCAG ATGGCAAAAC TACCGTTCTG AAAGACAAGC TTGTTGCCGA AAAAGGCGAA
ATTCTCGACG GCACCTTCAT GAACGTGAAG GCGTTGAGGA AGTTTTATGC AGAGCAGATT
GAGGATGCGA AGAAGAACGG CCAACTCCTC TCTTTGCACC TCAAGGCAAC CATGATGAAG
GTCTCTGACC CGATCATGTT CGGGCATGCC GTTTCCGTTT TCTATTCCGA CGTTTTCGAA
AAGCATGCTG CTACTTTTAA AGAACTGGGC GTCAATCCCA ACATGGGACT TGGCGACCTC
TACAACAAGA TACAGTCCCT GTCCGAAGCC AAGAGGGCAG AGATTGAGGC AGACATCCAG
GCTGAGTATG TCAAGCGTCC TGCTATTGCA ATGGTGGACT CCGACAAAGG GATCACCAAC
CTGCATGTGC CTAACGACAT CATCGTTGAT GCCTCCATGC CGGTTGTCGT GCGCGAGTCG
GGCAAGATGT GGAATGCGGA AGGCAAGCTG CAGGACACCA AGGCGATGAT TCCCGATCGC
TGCTATGCGA CCATCTACAA GGCGATTATC CAGGATTGCC AGAAGAACGG TGCCCTTGAT
CCTGCAACCA TGGGCTCTGT CCCCAACGTT GGTCTCATGG CCCAAAAGGC TGAAGAGTAT
GGGTCGCACC CCACGACGTT CGAAATTCCT GCAAACGGTA CTGTCCGTGT AGTTGCCGAG
GACGGCAAGG TGCTGATGGA GCAGGCTGTT GAAGCCGGCG ATATCTGGAG AATGTCCAGA
GCAAAAGATA TCCCGATCCA GGATTGGGTG AAGCTTGCTG TAAGAAGAGC ACGGGCAACG
GGCGCGCACG CCGTGTTCTG GCTGGATAAG AACAGGGCCC ATGATGCGAA TGTTATCGCA
AAAGTAGAGA AGTACTTGAA GGACCACGAT ACTGCGGGAC TGGAAATCAA GATTCTTGAC
CCGGTCGCAG CAATGAACTA CTCGTTGGAA AGAATCCGCA AGGGTCTGGA TACTATCTCC
GTAACCGGTA ACGTGCTTCG TGACTACCTC ACCGACCTCT TCCCGATTCT CGAAGTCGGC
ACCAGCGCCA AGATGCTCTC TATTGTTCCG CTTCTCGCCG GTGGCGGACT GTTCGAGACA
GGTGCGGGTG GATCTGCTCC CAAGCATGTC CAGCAATTTG TGAAGGAGGG TTACCTGCGC
TGGGATTCAC TCGGTGAGTT CTCTGCATTT GCCGCTTCTC TGGAGCATCT TGGCACTACC
TTTAAGAATG ATAAGGCGCT TGTTCTGGCC GAGACCCTCG ATCAGGCCAT CGCCAAGTTC
CTCGACAATA ACAAGTCGCC GGCCCGTAAG GTCGGCCAGA TCGACAACCG TGGCAGCCAT
TACTATCTTG CCATGTACTG GGCAGAAGCA CTGGCGGCCC AGTCAAAGGA TGCCGAGCTC
CAGGCGAAAT TTGCTCCCGT TGCAAAGAAG CTTCAGGAAA ACGAAGCCAA GATCAACGAG
GAGCTGATTG GCGCCCAGGG CAAGCCCGTT GATATGGGCG GCTATTACCA CGCCGACAAG
AAGATGGTGG AAAAGGCAAT GCGTCCTAGC CCGACCCTGA ACGCAATTAT TGATGCTATC
TAA
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| Protein sequence | MATHKIIWTD IDEAPALATY SLLPIIQKFT AGTGVEVETR DISLAGRILA TFPENLTEAQ
KVPDYLTQLG DLTHNPEANI IKLPNISASV PQLKEAIKEL QSQGYNVPDY PEDPKNDAEK
EIKERYAKVL GSAVNPVLRE GNSDRRAPVS VKNFSKKHPH KLGAWTSDSK AEVAHMTTGD
FYGNEKSIVM ENGGGFRIEL VGADGKTTVL KDKLVAEKGE ILDGTFMNVK ALRKFYAEQI
EDAKKNGQLL SLHLKATMMK VSDPIMFGHA VSVFYSDVFE KHAATFKELG VNPNMGLGDL
YNKIQSLSEA KRAEIEADIQ AEYVKRPAIA MVDSDKGITN LHVPNDIIVD ASMPVVVRES
GKMWNAEGKL QDTKAMIPDR CYATIYKAII QDCQKNGALD PATMGSVPNV GLMAQKAEEY
GSHPTTFEIP ANGTVRVVAE DGKVLMEQAV EAGDIWRMSR AKDIPIQDWV KLAVRRARAT
GAHAVFWLDK NRAHDANVIA KVEKYLKDHD TAGLEIKILD PVAAMNYSLE RIRKGLDTIS
VTGNVLRDYL TDLFPILEVG TSAKMLSIVP LLAGGGLFET GAGGSAPKHV QQFVKEGYLR
WDSLGEFSAF AASLEHLGTT FKNDKALVLA ETLDQAIAKF LDNNKSPARK VGQIDNRGSH
YYLAMYWAEA LAAQSKDAEL QAKFAPVAKK LQENEAKINE ELIGAQGKPV DMGGYYHADK
KMVEKAMRPS PTLNAIIDAI
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