Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_1285 |
Symbol | |
ID | 3739146 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 1445584 |
End bp | 1446543 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637778565 |
Product | HPr kinase/phosphorylase |
Protein accession | YP_384246 |
Protein GI | 78222499 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1493] Serine kinase of the HPr protein, regulates carbohydrate metabolism |
TIGRFAM ID | [TIGR00679] Hpr(Ser) kinase/phosphatase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 0.758729 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.00000064658 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | TTGAACACCA TCAGCCTCTC AATCGAAGAC CTCCTCAATG ACACGGAGTA CGGTCTCGAC CTCTCCCTCG TTGCGGGAAG GGGAGGGGTC GGCCATCGTG TGTTCAGCTC TCGCATTCAG AAGCCGGGCC TGGCCCTCAC CGGGTACACC GACCACCTCC ATCCGGACCG GGTACAGGTG CTCGGGAATA CCGAAATATC CTACTTGCGC CAGCTCCACG AGGAACTTGC TACGATTTTC GTCGACAAGT TCTGCGAATA CCCTATTTCC TGCATCATCG TCACCAAGGG GCTTGATCCG CCCCAGTTCC TCAAGGATGC GGCCGAACGC GAAGCAATCC CCCTGCTGGT GACGCCACTT CAGTCGTCAA CTTTTATCTC GCTCATTACA AAGTTTCTTG AGGAGCGGCT TCTCCCCACG ACCCATATCC ATGGTGTGCT CGTGGACGTT CTCGGCGTGG GCGTTCTGCT GCTGGGGAAA AGCGGCATCG GCAAGAGTGA GTGCGCTCTT GACTTGGTCA TACGTGGTCA CCGCCTCGTG GCAGACGACG TGGTGTTCGT GAAGAAGAAG ATGCCGGCAG CCCTTGTTGG ACAGGCTGCT GAGGCAATTC AGTATCACAT CGAAATCAGG GGACTTGGCG TCCTCAACAT CAAGAACCTT TTCGGCGTCT CCTCTATCCG TGAAAAAAAG ATCATTGAGA TGGTGATCGA GCTGGTTGAG TGGGACCCTC AGCAAGAATA TGACCGTCTC GGCCTTGACG ACGAAGTATA TACCATTCTC GATCTGGAGC TCCCCTACAT CAAGATTCCC GTCAGACCCG GACGCAACCT TACCTCCATC ATCGAGGTGG CCGCCCGCAA CCATCTCCTC AAGGGAATGG GTTACCACTC GGCCCGGGAG TTCCAGGAGA AGCTCCTGGC TCGGATGGAA AACCGTCCTC TTGGGGATGA GGTGGAGTAG
|
Protein sequence | MNTISLSIED LLNDTEYGLD LSLVAGRGGV GHRVFSSRIQ KPGLALTGYT DHLHPDRVQV LGNTEISYLR QLHEELATIF VDKFCEYPIS CIIVTKGLDP PQFLKDAAER EAIPLLVTPL QSSTFISLIT KFLEERLLPT THIHGVLVDV LGVGVLLLGK SGIGKSECAL DLVIRGHRLV ADDVVFVKKK MPAALVGQAA EAIQYHIEIR GLGVLNIKNL FGVSSIREKK IIEMVIELVE WDPQQEYDRL GLDDEVYTIL DLELPYIKIP VRPGRNLTSI IEVAARNHLL KGMGYHSARE FQEKLLARME NRPLGDEVE
|
| |