| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1284 |
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| Symbol | |
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| ID | 3739145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 1444956 |
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| End bp | 1445501 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637778564 |
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| Product | SSU ribosomal protein S30P / sigma 54 modulation protein |
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| Protein accession | YP_384245 |
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| Protein GI | 78222498 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
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| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.000000434521 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCAAATTA CCACAACGTT CAGGCACATG GAGCAGAGCG ATGCCCTCAA GGGCTACGCT
GCCGAAAAAC TGGAAAGGGT TAAGAAATAT ATTGACGAAC CCATTACCGC ACAGGTCTTC
CTCACCGTGG AGAAAATCCG CCACATGGCC GAGGTGACCC TGACCGCAAA GGGAGTCACC
ATCAAGGCCG CCGAAGAAAC TAACGACATG TACGCTGCCA TTGACGCTGT CGTGGACAAG
ATCGAGCGCC AGCTCCGGCG GTATAAGGAG CGCCTTAAGA ACCACAAGCC GGCCGTCGAC
AATCGAGCCC TCGAAGTGCA GAAGACCATC CTTACTGCCG AGAGTATCGA CCAGCAGCAA
GAGCCGGTTA TTGTCCGCAG CAAGACCATA ACCATCAAGC CGATGTCCGT CGAGGAGGCG
GTTATGCAGA TGGATCTCCT CCACAAGGAC TTCCTCGTTT TCACCGATTC CACCACCGAA
GTCATCAATG TCGTCTACCG TCGCAAGGAC GGAAACTACG GTCTCATAGA GCCGTCGCGC
AAATAA
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| Protein sequence | MQITTTFRHM EQSDALKGYA AEKLERVKKY IDEPITAQVF LTVEKIRHMA EVTLTAKGVT
IKAAEETNDM YAAIDAVVDK IERQLRRYKE RLKNHKPAVD NRALEVQKTI LTAESIDQQQ
EPVIVRSKTI TIKPMSVEEA VMQMDLLHKD FLVFTDSTTE VINVVYRRKD GNYGLIEPSR
K
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