Gene Gmet_1281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1281 
Symbol 
ID3739142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp1442060 
End bp1442569 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content56% 
IMG OID637778561 
ProductOstA-like protein 
Protein accessionYP_384242 
Protein GI78222495 
COG category[S] Function unknown 
COG ID[COG1934] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03002] lipopolysaccharide transport periplasmic protein LptA 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.000000052201 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACGAA TGCTCACGGT GCTGCTTTTC CTCGTGGTGG TATCACTGGG GACCGCGCAT 
TCCGCACAAC TCCCAAAGGG GGGGCGGCAA GGGCAGCCTA TTACCATTAA ATCCAATGAA
CTGTCCACGG ACAGCAGGCA TAATACGGCA ACATTCACCG GCAAAGTCAT CGCTCGCCAA
GGTGATCTGA CGATCTACGC AGACAAGCTG GTTGTCCACT ACAAGGCTGA TGGTGGCGAT
CTCGACAGAG TTGAAGCATC GGGCAACGTG CGGATCGTCC AGGGAGATCG CCTCGCCACG
GCTCGCGACG GGGTCTACCA GAGTGCCGAG CAGAAGATCG TTCTGACCGG CGACCCCAAG
GTTTTTCAAG GTGAGAATAC GGTGTCCGGC AAAGTCATCA CCTACTTTGT AGACGAAGAG
AAAAGCATTG TCACGGGCGG TCCGGACACA AGGGTAGAGG CGGTCATTAC GCCAAAGGAA
AAGGGGAAGG ATGGCGGCCA ACAGCGCTGA
 
Protein sequence
MKRMLTVLLF LVVVSLGTAH SAQLPKGGRQ GQPITIKSNE LSTDSRHNTA TFTGKVIARQ 
GDLTIYADKL VVHYKADGGD LDRVEASGNV RIVQGDRLAT ARDGVYQSAE QKIVLTGDPK
VFQGENTVSG KVITYFVDEE KSIVTGGPDT RVEAVITPKE KGKDGGQQR