Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_1260 |
Symbol | |
ID | 3739759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 1420132 |
End bp | 1421832 |
Gene Length | 1701 bp |
Protein Length | 566 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637778540 |
Product | acetolactate synthase, large subunit |
Protein accession | YP_384221 |
Protein GI | 78222474 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.00775476 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.00000116322 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAATGA CAGGTGCACG AATCCTCCTT GAATGTCTCA AGCGTGAAGG AGTTGATACT GTTTTCGGTT ACCCCGGGGG CACGGTGATC AATCTCTACG ACGAGCTTTT CAGCTTCAAG GATATCCGCC ATATTCTGCC CCGCCACGAA CAGGCAGGTG TCCATGCGGC TGATGGATTT GCCCGTGCCA CCGGCAGGGT CGGTGTCGCC ATCGCCACCT CCGGCCCCGG TGCCACCAAT ACGGTTACCG GTATCGCGAC CGCCTACATG GACTCCATCC CCCTTGTGGT GATAACCGGC CAGGTGCCCA CGGCCCTCAT TGGCAATGAT GCCTTCCAGG AGGTGGACAT CATCGGCATT ACCCGCCCCT GCACCAAGCA CAACTTTCTC GTGAAAGACG TGAAGGATAT CGCCACGATC ATCAAGAAAG CCTTTTACAT TGCCCGCACC GGGCGTCCCG GGCCGGTTCT CGTGGACCTG CCGAAGGATG TGCAGATCGC CACGGCCGAG TTTGAGTATC CCGAAGCCAT TGAGCTTCGC AGCTACAAAC CGACCGTGGA GGGTCACCCG AAGCAGATCG AGAAGGCCGT GTCCATGCTC CTGGCGGCTA AGAAGCCGGT CATGTACGTG GGAGGGGGCG CCATTTCCGG TGATGCCGCC GGTGAACTCA CTGCCCTAGC CACCAGACTC CACATCCCGG TCACCACAAC CCTCATGGGA CTCGGTTCCT TCCCCGAGGA CAATCCCCTC TCTCTCAAGC TTCTCGGGAT GCATGGCACC TATTTCGCCA ATATGGCGGT GACCAACTGC GACCTGCTGG TTGCCGTGGG GGCGCGCTTC GACGACCGGG TGACCGGAAA GATCGCCACC TTCGCTCCCC ATGCAAAGAT CATCCATATG GACGTGGACC CGACATCCAT TCGGAAGAAC GTCCGGGTTG ACCTTCCGAT TGTTGGTCAG GTCAAGGAAG TCCTTGGTCG CATGCTCAAG TCCCTTGATG AGAGCGGTGA CAAGGTAGCC GCGTTCCATA CGGCGATCGA ACCGTGGCTT GCGGAAATCG AGGGGTGGAA GCAGAAGCAT CCAATAACCT ACAAGCAGGC ATCCACGGTG ATCAAACCCC AGTTCGTGAT CCAGAAACTT CGTGAGCTTT CTGATCCCGA CGCCATTGTG GCCACCGACG TGGGGCAGCA CCAGATGTGG ACTGCCCAGT TCTTCGGGTT CCGTGAGCCC CGTACGCTCC TGTCGTCCGG CGGGCTCGGA ACCATGGGAT TCGGATTGCC AGCGGCCATG GGGGCCCAGG CAGCCTTCCC GAACCGGCAG GTCATCGCGG TTTGCGGCGA CGGCGGTTTC CAGATGAACC TCCAGGAGGT GGCAACGCTG GTCCAGAATC GGCTTCCCGT GAAGATCGTC ATACTCAACA ATAACTTCCT CGGCATGGTG CGCCAGTGGC AGGAACTCTT CTTCGATAAG CGCTATTCAC AGACCTGCAT GGAGCTTCCC ATTGATTTCA TCAAGCTTGC CGAGGCGTTC GGGGCTAAGG GGTTCCAGGC GACAAAATCC GACGAGGTGG AAGCTACCAT CAAGAAGGCC TTCGAGACGC CAGGACCGGT TATCATGGAA TTCAAGATCG CCCGGGAGGA GAAGGTTCTC CCCATGGTTC CTGCCGGGGC GTCGCTCAAT GAAATGGTGC TCAATGCCTG A
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Protein sequence | MKMTGARILL ECLKREGVDT VFGYPGGTVI NLYDELFSFK DIRHILPRHE QAGVHAADGF ARATGRVGVA IATSGPGATN TVTGIATAYM DSIPLVVITG QVPTALIGND AFQEVDIIGI TRPCTKHNFL VKDVKDIATI IKKAFYIART GRPGPVLVDL PKDVQIATAE FEYPEAIELR SYKPTVEGHP KQIEKAVSML LAAKKPVMYV GGGAISGDAA GELTALATRL HIPVTTTLMG LGSFPEDNPL SLKLLGMHGT YFANMAVTNC DLLVAVGARF DDRVTGKIAT FAPHAKIIHM DVDPTSIRKN VRVDLPIVGQ VKEVLGRMLK SLDESGDKVA AFHTAIEPWL AEIEGWKQKH PITYKQASTV IKPQFVIQKL RELSDPDAIV ATDVGQHQMW TAQFFGFREP RTLLSSGGLG TMGFGLPAAM GAQAAFPNRQ VIAVCGDGGF QMNLQEVATL VQNRLPVKIV ILNNNFLGMV RQWQELFFDK RYSQTCMELP IDFIKLAEAF GAKGFQATKS DEVEATIKKA FETPGPVIME FKIAREEKVL PMVPAGASLN EMVLNA
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