| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1256 |
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| Symbol | |
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| ID | 3738799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 1415278 |
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| End bp | 1416432 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637778536 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_384217 |
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| Protein GI | 78222470 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.00350955 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.00190224 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAAAC TCACCATTCT TGGCTCAACC GGTTCCATCG GGACCAGCAC TCTGGAGATC
GTCGCAGCGC ACCCGGACCG ATTCCAGGTG ATTGCCCTCA CGGCGGGGAG TAACCTGGAG
CTTCTCAAAC AACAGGTTGA AGTGTTTCGG CCCAGGCTTG TCAGCGTTCT GACCGCTGAC
CTGGCCCGAC AGTTGGACCG GATGCTCTCG GATCCGAAAC CGGAAATCCA TCATGGGATT
CCCGGTCTTA TCGCCGCTGC CACTGCCGGT GAGGCCGATG TCGTGGTTGC CGCTATTGTT
GGGGCTGCCG GCCTCGTGCC GACCGCCGCC GCAATCAAGG CCGGCAAGGA CGTCGCCTTG
GCAAATAAGG AGACCCTTGT CACCGCCGGC CGGATCATGA TGGACCTCGT CAGGGAAAAC
GGGGTCAGGC TCTATCCTGT CGACAGCGAG CACTCGGCGG TCTTTCAGTC CCTGGAGGGG
CAGAGCGGAA AGGATGTGAA GCGGATTATT CTGACCGCAT CGGGGGGACC ATTTCTGAAT
CTTCCCCTTG ACCGCCTTTC ACGGGTTTCG GTCGCCGATG CCCTCAATCA CCCCAACTGG
AGCATGGGGC AAAAGATAAC CATCGACTCG GCCACCATGA TGAACAAGGG ATTGGAGGTG
ATCGAGGCCC GCTGGCTTTT TGACACGCCG GCGGAGCGGA TTGCCGTGAA TATTCACCCC
CAGAGCATCA TTCACTCCAT GGTTGAGTAT GTGGACGGCT GTGTTATGGC CCAGTTGGGG
GTTCCCGACA TGAAGGCCCC CATTGCCTAT GCCTTGACCT ATCCGGAACG GATTCCTACG
GGGGTGAAGC CCCTTGACCT GACCGCGTTG TCCGGACTCA CCTTCCTGGC TCCCGACTAT
CAGCGCTTCC CCGCCTTGAA ACTGGCCTAC GATGCCCTTG CCGCTGGAGA AAGCATGCCG
GCGGTCATGA ACGCCGCCAA CGAGGTGGCT GTCGAGGCCT TCCTCAAGGG GAAAATCGGG
TTTACCGGTA TCGCCACTTC TATCGCTCGA ACCATGGATG CACACGAGCC CCATACCCTT
GCCACCATCG AGGATGTCCT TTCCTCTGAC CTCTGGGCGA GGGAGAAGAG CAGGGAGCTC
ATAGGGTTGT CCTGA
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| Protein sequence | MKKLTILGST GSIGTSTLEI VAAHPDRFQV IALTAGSNLE LLKQQVEVFR PRLVSVLTAD
LARQLDRMLS DPKPEIHHGI PGLIAAATAG EADVVVAAIV GAAGLVPTAA AIKAGKDVAL
ANKETLVTAG RIMMDLVREN GVRLYPVDSE HSAVFQSLEG QSGKDVKRII LTASGGPFLN
LPLDRLSRVS VADALNHPNW SMGQKITIDS ATMMNKGLEV IEARWLFDTP AERIAVNIHP
QSIIHSMVEY VDGCVMAQLG VPDMKAPIAY ALTYPERIPT GVKPLDLTAL SGLTFLAPDY
QRFPALKLAY DALAAGESMP AVMNAANEVA VEAFLKGKIG FTGIATSIAR TMDAHEPHTL
ATIEDVLSSD LWAREKSREL IGLS
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