Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_1236 |
Symbol | |
ID | 3738413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 1394788 |
End bp | 1395642 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637778516 |
Product | binding-protein dependent transport system inner membrane protein |
Protein accession | YP_384197 |
Protein GI | 78222450 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.143707 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 0.209567 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTTTC GGGAAAGCTG GTTCCATACG GTTTTCTGGA AGCGGTTCCG GCACAACCGG TTTGCCATGG CCGGCGGGTG TGTCGTGCTC CTTCTCTTTG TGGTGTCGCT GCTGGCTCCG TATATCACCC CCTGGGACCC CCACGCCATC GACGCCTATC ATGTGCTCCT TCCCCCTTCG GCGAACCACT GGTTCGGCAC CGACGAGCTG GGGCGCGACG TCTTTACCCG GGTGGTCTAC GGGGCGCGGA TTTCCCTCAA GGTGGGGTTC GTCTCGGTGG GGATCGCCGT GGCCATCGGG GTGGTGCTGG GGCTTGTTTC CGGCTTCTAC GGCGGCATCA TCGATACCGT CATCATGCGG TTTGTGGATA TCATGCTCTG TTTCCCCACC TTTTTCCTGA TCCTGGCGGT GATCGCTTTT CTGGAACCGT CCATCTGGTA TATCATGGCG ATTATCGGCC TCACGGGGTG GATGGGGGTG GCGCGGCTCG TGCGGGCCGA GGTGCTGTCG CTGCGGGAGC GGGACTTCAT TCTGGCGGCC CGGGCGCTGG GGGCGTCCGA TGCGCGGATC ATCTTCCGTC ACATCCTTCC CAACGCCCTG TCACCGGTGC TCGTCTCTGC TACCCTTGGC GTGGCAGGGG CCATCCTCAC GGAGTCGGCC CTGTCGTTTC TCGGCATCGG CGTGCAACCC CCCACGCCCA GTTGGGGGAA CATCCTCACG TCGGGCAAGG ATTACATCGA GTTCGGTTGG TGGCTCTCCC TGTTCCCCGG CCTGGCCATT CTGGTGACGG TCCTTGCCTA CAACCTCCTG GGGGAGGGGA TTCGCGACGC CCTCGACCCC CGGCTGAATC GCTGA
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Protein sequence | MAFRESWFHT VFWKRFRHNR FAMAGGCVVL LLFVVSLLAP YITPWDPHAI DAYHVLLPPS ANHWFGTDEL GRDVFTRVVY GARISLKVGF VSVGIAVAIG VVLGLVSGFY GGIIDTVIMR FVDIMLCFPT FFLILAVIAF LEPSIWYIMA IIGLTGWMGV ARLVRAEVLS LRERDFILAA RALGASDARI IFRHILPNAL SPVLVSATLG VAGAILTESA LSFLGIGVQP PTPSWGNILT SGKDYIEFGW WLSLFPGLAI LVTVLAYNLL GEGIRDALDP RLNR
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