Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_1218 |
Symbol | |
ID | 3738758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 1372309 |
End bp | 1375110 |
Gene Length | 2802 bp |
Protein Length | 933 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637778498 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_384180 |
Protein GI | 78222433 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2202] FOG: PAS/PAC domain [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.493639 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0000319453 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGAGGG GGGAGCCGTT GAAGGGGGAA GGCAAAAAGT TACGGATAGG TGAAGATACC CGGTCGACGG GCCGGAACAA ACAGCACAGC AGCAGGGTAA AGGGGAGCGA AGAGGAAATT TCCTTTCTTG CCGATTTGCT TGAAGGCTCC GATCAGCCCT TTGGTATCGG TTACCCGGAC GGAAGAATCG GCCACGTGAA CGGCGCTTTC GAGCGGCTTA CCGGCTACAG CAGGGAAGAA TTGCGGGCCA TGAACTGGAA CAGCTCTCTC ACCCCGCCCG AATGGCTGGA CAGGGAACGG GCGATACGGG AGGAGATTTG CCGCACTGGC GAGTCCGTTA GGTATGAGAA GGAATATATC CGGAAAGATG GCGCTCGGAT TCCGGTCGAA CTTCTCGTCC ATGTCAAAAA GGATGAAGCA GGCAGCCCCC TCTATTACTA CTCCTTCATA ACCGATATAA CCGAGCGCAA GAGGCTCGAT AATCAAATAC AACGTCTTTC CTATTTCCCA CAGTTCAACC CGAATCCGAT AGTCGAGACC GATTACGCCG GCAGGGTAAC TGTCTGTAAT CCGGCCACGC ACAAGGTTCT TGAGAGCATC GGCGCGGGGG CCGATCCCGG CCTGTTTGTC CCCGCGGATC TGGGCACTAT TCTCCATGAG TGGGACGGAA AAAGCGAAGC AAGCACTATC TGCGAGCTTT CCATCGGCAC GAGGGTCTTC CGCGAGACCA TTTTTTTTAC TCCCCAGTTT CCTGTCGTGC GCATCTATGT CCACGATATC ACCGATATCA GAAATGCCGA GAAGTCGCTG CGAGAAAACG AGGAACGGCT CCGGCTCTTC ATCGAGCACG CTCCCGCAGG ACTCGCGATG TTTGATCGCG ATATGCGTTA CCTGAACGTC AGCCGGCGCT GGCTGACCGA CTACAGGCTC GGCGACCGTG ATCTGCGCGG ATTAAGCCAC TACGAGGTTT TCCCGGAGAT TCCCGAAGAG TGGAAGGAAG CCCAACGCCG CGGGCTGGCC GGGGAGGAAC TACGGGCGGA AGGAGACCGT TTCATGCGGG CCGACGGCTC GCTGCAGTGG ATACGGTGGG AGATTCATCC CTGGCACGAT TCGTCGGATC AAGTGGCTGG AATTGTTATT TTCTCCGAAG ACATCACCGA GAGTAAGAAG GCAGAGGAAA AGATTTTACT GTTAAACCAG CAATTGGAAC AGCGGGCAGC CGAGTCGCAG CTTATCCTCG ACACCTCGCC CATCGGCCTG GCTATTGCCA ACGATCCCCA AGGCGTCATG ATTCGGGGGA ATCCGGCCCT GGAAAAGTTG CTTGGAGTAA CGGCCGGCAG CGAACTTTCC AAAAATGCGT TCAACTCGGC AGGTTATCGG GTTTTCAAGA ATGGGGAGGC GATTGCTCCA TCGCAATTGC CCATGCAACG GGCTGCCCGC GGTGAACCCG TTTCCGGAGA AACCCTCGAC ATCGTACGGG AGGATGGGAC CGGTCTGAAT CTGTACTGTT CCGCAGCAAC GCTGCGGGAT AATGAAGGAA AGCCATGCGG GGCCGTCGGT GCCTTTATGG ATATAACCGA ACGCAAGGAG TTGGAGGATG TTGTCATCAA GAGCCAGCTC GACACCTATG CCATCCTTGA CAACATCCCC TTTAATGCCT GGCTCAAGGA CACGGAAGGT CGCTATGTGA AGGTGAATTG GCAGTTCGCT ACATTCTGCG GCTACACATC GCCGAAAGAG GTTGTCGGGA AAACGGACAT GGACCTCTGG CCTATGCACA TGGCCGAGGC ATATTGCGCC GACGATCAGG ACGTCATGAG GAGCGGCCAG AGAAAATTAA TCGAAGAACA GGTTGTTGAG CATGGAGAGG AGAGGTGGTT TGAAACGTTC AAGGCACCCC GGTTTGACCA GAACGGCACG GTCATCGGCA CGACCGGTAT TGCCAAAGAC ATCACCGAAG CCAAGAGGGC CGTGGAAGCT TTGCAGTCTA TCCGCAACGA ACTGGAGCAG AAGGTTGCGG AGCGAACCTG GGAGCTTGCT ACCGCGCTCA ATGACTTGCG AAAAGAGAGC TCTGACCGTA TCCAGGCTCT GGAGGCGCTC CGCGAACAGG AGCGGCTTCT CATCCATCAG GGGCGTCTCG CGGCCATGGG GGAGATGATC GGCAATATCG CGCATCAGTG GCGGCAGCCG TTGAATACGC TGGGGCTCAT CATTCAGGGG CTCTCCATGA GTGAAGAGTT GGGCGAGCTC ACGAAAGACC ACCTTGATGA AAGAGTTAAC CGGGCCATGC AGCTGATTTA TCACATGTCC CAGACCATCG ACGACTTCAG GAATTTCTTC AGGCCCGACA AGGAAAAAGT CCGGTTTGAA ATGAAGCAGG CGATCAATAA CGCTCTTTCC CTTATGGGAG ATAACTTCAG GAGTCTCGGG ATAGAGGTTT CGTGCGACTC CCCACAGGAC ATGTCTATCG CCGGATATCC CAATGAATTT TCCCAAGCAC TCCTCAATAT TCTCATGAAT GCCCGGGATG TCCTCCAGGA GCGGAAAGTG GAGGCCCCGC GTGTCTTGGT GCGTCTGTTC GCGGAAGATA ACCGCGCTGT GGTCACCATT GCGGACAATG GTGGTGGTAT TGATAGGGAG ATCATTGGAA AGGTATTCGA TCCGTACTTC ACCTCAAAGG GCCCGAGCAG CGGTACAGGG CTCGGGCTCT TCATCGCGAA GACCATTATC GAAAAGAACA TGGGTGGTAC GCTCACCGTG CGCAATAGCG GCGAAGGAGC GGAATTCAGG ATAGAGGTCT GA
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Protein sequence | MKRGEPLKGE GKKLRIGEDT RSTGRNKQHS SRVKGSEEEI SFLADLLEGS DQPFGIGYPD GRIGHVNGAF ERLTGYSREE LRAMNWNSSL TPPEWLDRER AIREEICRTG ESVRYEKEYI RKDGARIPVE LLVHVKKDEA GSPLYYYSFI TDITERKRLD NQIQRLSYFP QFNPNPIVET DYAGRVTVCN PATHKVLESI GAGADPGLFV PADLGTILHE WDGKSEASTI CELSIGTRVF RETIFFTPQF PVVRIYVHDI TDIRNAEKSL RENEERLRLF IEHAPAGLAM FDRDMRYLNV SRRWLTDYRL GDRDLRGLSH YEVFPEIPEE WKEAQRRGLA GEELRAEGDR FMRADGSLQW IRWEIHPWHD SSDQVAGIVI FSEDITESKK AEEKILLLNQ QLEQRAAESQ LILDTSPIGL AIANDPQGVM IRGNPALEKL LGVTAGSELS KNAFNSAGYR VFKNGEAIAP SQLPMQRAAR GEPVSGETLD IVREDGTGLN LYCSAATLRD NEGKPCGAVG AFMDITERKE LEDVVIKSQL DTYAILDNIP FNAWLKDTEG RYVKVNWQFA TFCGYTSPKE VVGKTDMDLW PMHMAEAYCA DDQDVMRSGQ RKLIEEQVVE HGEERWFETF KAPRFDQNGT VIGTTGIAKD ITEAKRAVEA LQSIRNELEQ KVAERTWELA TALNDLRKES SDRIQALEAL REQERLLIHQ GRLAAMGEMI GNIAHQWRQP LNTLGLIIQG LSMSEELGEL TKDHLDERVN RAMQLIYHMS QTIDDFRNFF RPDKEKVRFE MKQAINNALS LMGDNFRSLG IEVSCDSPQD MSIAGYPNEF SQALLNILMN ARDVLQERKV EAPRVLVRLF AEDNRAVVTI ADNGGGIDRE IIGKVFDPYF TSKGPSSGTG LGLFIAKTII EKNMGGTLTV RNSGEGAEFR IEV
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