| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1173 |
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| Symbol | |
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| ID | 3739946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 1296386 |
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| End bp | 1299625 |
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| Gene Length | 3240 bp |
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| Protein Length | 1079 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637778449 |
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| Product | AsmA |
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| Protein accession | YP_384136 |
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| Protein GI | 78222389 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3164] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000700757 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.126204 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTCCC GCGGCGCAAA GACCCTCCTC ATCTCCATAC TGCTCATCCT GGGCATCCTT
GCCGGCGGGG TCGCGATCTT TTTCCTGGCG CACTTCCATG AACTCGACAC CTACAAGGAC
CAGATCCTTG CCGAAGTCCA GAAGAGCCTT AACCGCCAGG TCACGTACGA GAAGGGGGAA
GTAACGTTCC GCTTTACCCC TGCCTTCAGC TTTACCAAGG TTGTCATCAA GGAACGGGAC
GGCCTGACAA CGTTCGCCAC AGCAGACCGC GTCAGCTTCC GTCTTGCGCT CCTGCCACTC
CTTGAAGGGA AAGTCGTCGT CGGAAAGCTC ATGGCGGAAC GGCCGACCAT CCAGATAATC
CGCAATAGGG ACGGCACCTT CAACATCAGC GACCTGCTGG AAGAAAAAAA AGGGGCTCCT
CCCCTCCGGA TGAGAGGGAT CAGTATCCAC GACGGGAAGA TTACCTTCAC CGACCAAGCG
GCAACCGCCA ATGGAGTTGT GACCAGGCTG GAAAAGACCG CTCTGGAACT GGACCGGATC
GTCCGCGGCA AAGAGACAGA ATTCACCATA GCAACCACCC TGGCACAGGG AGCGACCACC
GGGACGCTTT TCGCCCGCGG CTTGGCAGAT CTTCCGCGAG AGGGGCATCC GATGACGGAA
ACGCGCATCG ATGCGAAGGT CGAGGCCAGG AATCTTTCCG CTGCCCATTA CTGGCCCTAC
TATGGCCGCT TCGTCCCCTT CGATCCCCTA GCGGGGCTCT TCGATGTCAA GGCATCCATC
CATGGGACGG CGGCAGACTT CACCTCAAAG GGGACAGTCC ACGTCGCCGG GCTTCGCTTT
TCCTATCCCA AGGTCTTCCA CGCCGTTCTC ACCCCTCGCG ACCTGCAACT GAACTACAAG
TTGAAGCGGG ATCGGTACCA GGTTGACGTC TCCGCGGTCG ATTTCCGGAT GGACGGACTC
ATGGTCAAGG GGAACTGCGC CATCAGGGAC ATCAACACCA ATGATCCGCG GATCGTGGCC
CGGGCCGTCA TCGATCCCTT CAAGCTGGAG AGGTTCTTCT ACTACATCCC CTTCGGCATC
ATCGCCGACG ATGCATCCCA GTTCATCGAA CGGTACATCA AGGCAGGAAC GTACCGGTTG
GACGAGGGAC GGCTCGATGG CAGGGTGAGC CAGATCCTCC ACATGGAGAA GGACCAGAAC
TACAACATCC TCTCCATCAA GGCCCGGGCA CTGGAAGGGG GTGTCGTGGA CCTGGGGAAT
GGCGTCCCCT CCTTCAACAG CATCAAAGGG GATCTGTTGC TGTCGGGCAA GAACTTCATC
CTGCGCAACA TGTCGGGAAA GTTTGGTACG TCACCATTCA CCATGAACGG AATGATTGCC
GACTACCCCC TCAACACACC ATCGTCCTAT CCGTTCAACG CAGCATTCAC CCCACAACAG
CAGGAACTTG CCTGGCTCTT GGGAAAACAC CTGGGCGGAG GACTTTCGTT CTCGGGGCAC
ACGCCATTAA CCATTACCGG TGCCGGGTAT ACGTCCGCGT ATACTCTGTC CGGCCAGTGG
AATCTGGCAA ATGCCGGCTA CAACGTAACC AATGTCATCG CCAAGCCGGC TGGAGTGGCC
AACCAGCTTT CCTTCAGCAT GAGCCTCTCA AAGCCAGGAA TGAGCGCCTT TGCCTGCCAA
TACAATCTCC CCCCCCTCTC GCTGGTCCTG TCGACCCGGT ATCGGCCGGG GCAAGATGTC
CCCAACCATA TCGACATACG GACGAACCAG TTCGAGATGG CGCCCCTTGC CCCCCTGCTC
CCACGGGTGA AGTCCTATCA ACCCCAGGGG AGGATACAGG TTGCGGCCCG TGCCAACGGG
AGCGCGGAAA CCATTGGCGG ACTGAACTGG ACAGGGGATG TCCTTCTTGC CGGAGCGGCA
TTCCAACCAC CAGGGGGCAT CAAGCGCGTC CGCAACATCA ACGGTGGTAT CCGCTTCAAG
GGCACCGACC TGGAAACACC GCGGCTCTCA GCCATGCTGG GGAACTCCCT CCTCGTCGGC
ACGGGAACCC TGTCCAACTT TGACAACCCG GCCATCTCTC TCGAATTCTC CGCTCCCGCT
CTCGACGTGG CCGACCTGGG GCTAAAGGCC CCTGAGGGAA AGAGCCTAAA AATCAAGAAG
GTGCAAGGTT CCGTCACCCT TGCCCAAGAC ACCCTCCAGG TAAAGTCACT GTCCGGCACG
GTGAATGATT CTGCCCTGAA TCTGAAGGGG ACAGTGGAAC GGCTACAAAG CCCACGGGTC
GACGTGACGG TTACCTCTCC CTTCCTGAAT ATCGAAGATG TCCTCCTTCT TGGTGGTCTG
GAACGGAGCG CAAAAGCATC GGCCCAGAAT GGCACCGCCA CCATCAAGGC GTCGGTCACT
GCGGATGAGG GAAAATTCAA AGGATTTCGG TTCAGGAAGC TCCATACGGT TGCCATGCTC
GACAACCGGA TCCTCTATCT CCAGCCCTTC GAATGCGGCG CCTTCGGTGG CCAGGTTGCG
GGAACTTTCA GGGCCGACTT CGGCTCAAAC GGCCCAACCC GCTACCAGGC AAATCTCAAG
GCTGATAAAA TTTCCGCCGA AGACTTGGTC CAGGCGCTGA ACCTGAGACT CCACAATGAA
ATAATCACCG GCTCCCTGTC GCTTCATGCA GACGTCACCG CCAAGGGAGA AACCGCCGAT
GAACTGAGGC GAACCATCCT CGGCAGCGTC AAGCTTCATC TCGAAAACGG CAAACTGCGG
CGGTACTCAG TGCTCTCCAA AATATTTTCC CTCCTGAACG TGTCGCAACT CTTCACATTC
CATCTCCCCG ATATGGTTGC CGACGGCATG CCCTATAACC GGATCGACGC AACCCTCTCT
CTCAGGGATG GGATCGTGTC TTCAAAAGAC TTCTTCATCG ACAGCAACGC CATGAATATT
TCGGCTGTGG GCTCCATTGA CCTCGTCAAG GAGGAGATTG ACGCAACCGT GGGGGTCCAG
CCGCTCCAAA CCGTCGACAA GGTGGTAAAC CGGATACCGA TCGTCGGCTG GATCCTTACC
GGCAAGGACA AACACCTCAT CTCCACCTAT TTCGAGGCCA AGGGAAAGTG GAGCGACCCT
GTCGTAAAGG CCGTGCCGGT CAAGTCCATG GCCAAGGGAG TGCTCGGAAT CTTTAAACGG
TTATTCCAGC TTCCCGCCAA ACTCATTACC GACACAGGTG AAGTCATCAT CGGAAAATAA
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| Protein sequence | MISRGAKTLL ISILLILGIL AGGVAIFFLA HFHELDTYKD QILAEVQKSL NRQVTYEKGE
VTFRFTPAFS FTKVVIKERD GLTTFATADR VSFRLALLPL LEGKVVVGKL MAERPTIQII
RNRDGTFNIS DLLEEKKGAP PLRMRGISIH DGKITFTDQA ATANGVVTRL EKTALELDRI
VRGKETEFTI ATTLAQGATT GTLFARGLAD LPREGHPMTE TRIDAKVEAR NLSAAHYWPY
YGRFVPFDPL AGLFDVKASI HGTAADFTSK GTVHVAGLRF SYPKVFHAVL TPRDLQLNYK
LKRDRYQVDV SAVDFRMDGL MVKGNCAIRD INTNDPRIVA RAVIDPFKLE RFFYYIPFGI
IADDASQFIE RYIKAGTYRL DEGRLDGRVS QILHMEKDQN YNILSIKARA LEGGVVDLGN
GVPSFNSIKG DLLLSGKNFI LRNMSGKFGT SPFTMNGMIA DYPLNTPSSY PFNAAFTPQQ
QELAWLLGKH LGGGLSFSGH TPLTITGAGY TSAYTLSGQW NLANAGYNVT NVIAKPAGVA
NQLSFSMSLS KPGMSAFACQ YNLPPLSLVL STRYRPGQDV PNHIDIRTNQ FEMAPLAPLL
PRVKSYQPQG RIQVAARANG SAETIGGLNW TGDVLLAGAA FQPPGGIKRV RNINGGIRFK
GTDLETPRLS AMLGNSLLVG TGTLSNFDNP AISLEFSAPA LDVADLGLKA PEGKSLKIKK
VQGSVTLAQD TLQVKSLSGT VNDSALNLKG TVERLQSPRV DVTVTSPFLN IEDVLLLGGL
ERSAKASAQN GTATIKASVT ADEGKFKGFR FRKLHTVAML DNRILYLQPF ECGAFGGQVA
GTFRADFGSN GPTRYQANLK ADKISAEDLV QALNLRLHNE IITGSLSLHA DVTAKGETAD
ELRRTILGSV KLHLENGKLR RYSVLSKIFS LLNVSQLFTF HLPDMVADGM PYNRIDATLS
LRDGIVSSKD FFIDSNAMNI SAVGSIDLVK EEIDATVGVQ PLQTVDKVVN RIPIVGWILT
GKDKHLISTY FEAKGKWSDP VVKAVPVKSM AKGVLGIFKR LFQLPAKLIT DTGEVIIGK
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