| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1153 |
|---|
| Symbol | |
|---|
| ID | 3740380 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 1278894 |
|---|
| End bp | 1280237 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637778429 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_384116 |
|---|
| Protein GI | 78222369 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.000974304 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.0417904 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGAGTCGG TTTTAGGCGA GTTGGCCGTC ATATTCCTTC TTATCCTTGG TAACGGTTTT
TTTGCCGGTT CAGAGCTTGC CATCATTTCT GCCCGCAAGA GCAGGATCGC GCAACTGGTC
GCCGCCGGCG ACCCGAAGGC GAAGATCGTC GAACAACTTC AAGACGATCC GCACCGGTTT
CTCGCCACCG TCCAGATCGG GGTCACGCTG GTGGGCTCCC TTGCCTCGGC CGTCGGCGGC
GCCACGGCGG TCCGTTACCT GAAACCCCTC CTGGAGGGGA GTTCCATCAA GTTTTTCCAT
AATGCCGCCG AACCGCTTTC CATCGGCATC GTGGTGGTCC TGATCTCCTA CTTTTCCCTC
ATTTTCGGCG AGTTGGTCCC CAAGACCGTC GGGCTTCAGT ACGCGGACCG GATGGCCCTC
CATGTGGCCA AGCCGATCAA TTTCATGGCT CGCGTCACCG GGGTGGTGGT AAGTTTCCTC
ACCCTCTCCA ATCGGGCTGT CCTCGCCGTG CTGGGGATCA AGGCAGAAGG AGATCAGGCC
TTCGTCACCC CCGAGGAGGT CCAGCATATC GTGGCGGAAG GTCACGAGGC GGGTGTATTC
AGTTCCACCG AGCAGGAGTT CATCCGCAAT ATCTTTGATT TTACCCACAC CTGTGTCCGG
GAGGTGATGG TGCCCCGTAC CCGCGTTGTC GCCCTTGATC TGGGACTTTC GCGAGACGAA
CTGGTCAACA CGGTGCTCGA AAACAAGTAT TCCCGCTATC CCGTCTACCG GGAGAGCATC
GAGAACGTAA CTGGTTTTAT CCACGGAAAG GATCTTCTCG GGGGAATAGT GACTGACCCT
GCCTTCGACA TCAAGTCGAT CATTCGTCCG CCGTTTTATG TCCCTGAGGG AAAGAAGGTC
AATGAGCTGC TGAAGGAAAT GCAACGCAAG CGGATTCACA TGGCCCTCGT GGTGGACGAA
TACGGCGGCA TCAGCGGCCT TGCCACGACG GAGGATCTTC TGGAGGAACT CGTGGGTGAG
ATCGAGGATG AGCACGACAT CGGCGAGCCG GGGAGCATCC AGCGGCTTCC AGACGGCAGC
CTCCTGGTGG ACGCCCTCGT CTCCATCAGC GACCTTGCGG AGCATCTGGA AATAAAGCTT
GGGGACGATA TCCCCTATGA TACCCTGGCA GGGCTCATTC TCGATCGGCT TGGCCGTTTC
CCGGAAAAGG GGGAGCGCGT TGAGTGGGAC CGATTTACCC TCATCTGCGA GGAGGTGAAA
AAGACCGCCG TTGTCAAGGT CCGGATCGTG GAAACGGTAC CGTCGGATTC AGGTCACGAA
GAAGACGGGG ATGTGAAGGT CTGA
|
|---|
| Protein sequence | MESVLGELAV IFLLILGNGF FAGSELAIIS ARKSRIAQLV AAGDPKAKIV EQLQDDPHRF
LATVQIGVTL VGSLASAVGG ATAVRYLKPL LEGSSIKFFH NAAEPLSIGI VVVLISYFSL
IFGELVPKTV GLQYADRMAL HVAKPINFMA RVTGVVVSFL TLSNRAVLAV LGIKAEGDQA
FVTPEEVQHI VAEGHEAGVF SSTEQEFIRN IFDFTHTCVR EVMVPRTRVV ALDLGLSRDE
LVNTVLENKY SRYPVYRESI ENVTGFIHGK DLLGGIVTDP AFDIKSIIRP PFYVPEGKKV
NELLKEMQRK RIHMALVVDE YGGISGLATT EDLLEELVGE IEDEHDIGEP GSIQRLPDGS
LLVDALVSIS DLAEHLEIKL GDDIPYDTLA GLILDRLGRF PEKGERVEWD RFTLICEEVK
KTAVVKVRIV ETVPSDSGHE EDGDVKV
|
|---|
| |