| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1122 |
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| Symbol | prpB |
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| ID | 3741579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 1242042 |
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| End bp | 1242956 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637778398 |
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| Product | 2-methylisocitrate lyase |
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| Protein accession | YP_384085 |
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| Protein GI | 78222338 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2513] PEP phosphonomutase and related enzymes |
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| TIGRFAM ID | [TIGR02317] methylisocitrate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 57 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTGAGC AGATTTCCGC CGGGAAGCTT TTCCGCAGGG TCATTGATGC TGAAAAGCCG
CTTCAGATTG TGGGGACGAT CAACGCCTAC TGCGCAATCC TGGCCGAAAA GGCCGGTCAC
CGGGCAATCT ACCTCTCCGG CGCCGGGGTC GCGAACGCCT CGTTCGGTCT TCCCGACCTC
GGTATAATCT CCCGCAGTGA CGTCCTGGAG GAGGTGAGGC GGATTACCGG CGCTTCCCCC
CTGCCGCTCC TGGTCGACAT CGATACGGGA TGGGGAGAGG AATTCGGGAT CGACCGCACG
ATTAAGGAGA TGATTCGCGC AGGGGCGGCG GCGGTTCACC TTGAGGATCA GGTCGAACCG
AAACGCTGCG GCCATCGCCC CAACAAGTCC ATTGTTTCAA CAGGCAGAAT GGTGGACCGT
ATAAAGGCTG CGGTGGATGC CCGAAGCGAT GGGGATCTCA TGATCATGGC CCGTACCGAC
GCTCTGGCGA CTGCAGGGCT CGACGCCGCC GTCGAAAGGG CGGCCCTCTA TGTGGAGGCC
GGCGCGGAGA GCATCTTTGC GGAGGGGGTG ACCGACCTTG CCATGTACCG GCGGTTTGCC
GATGCCGTTG ATGTGCCGCT CCTGGCCAAT ATGACCGAAT TCGGGAAGAC CCCCTACTAC
ACGAAAGAGC AGTTTGCTGC GCAGGGGGTC GCTATGGTGC TCTATCCCCT GAGCGCCTTC
CGGGCCATGA GCAGGGCCGC ACTGGAGGTG TATGAGACCA TCCTCCGCGC CGGAACCCAG
GAGCCGGTTG TGGCGGCCAT GCAACCCCGG GAGGAACTTT ACGAACTGCT CCACTATTAC
GACTATGAGC GGAAGCTCGA CCGGCTGTCT TCCCGTGACG GCGTTGAAAG CGGCGAGGGG
AGGGAGAAAC GGTGA
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| Protein sequence | MSEQISAGKL FRRVIDAEKP LQIVGTINAY CAILAEKAGH RAIYLSGAGV ANASFGLPDL
GIISRSDVLE EVRRITGASP LPLLVDIDTG WGEEFGIDRT IKEMIRAGAA AVHLEDQVEP
KRCGHRPNKS IVSTGRMVDR IKAAVDARSD GDLMIMARTD ALATAGLDAA VERAALYVEA
GAESIFAEGV TDLAMYRRFA DAVDVPLLAN MTEFGKTPYY TKEQFAAQGV AMVLYPLSAF
RAMSRAALEV YETILRAGTQ EPVVAAMQPR EELYELLHYY DYERKLDRLS SRDGVESGEG
REKR
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