Gene Gmet_1112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1112 
Symbol 
ID3738605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp1234934 
End bp1235476 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content65% 
IMG OID637778390 
ProductNADH ubiquinone oxidoreductase, 20 kDa subunit 
Protein accessionYP_384077 
Protein GI78222330 
COG category[C] Energy production and conversion 
COG ID[COG1941] Coenzyme F420-reducing hydrogenase, gamma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value0.668315 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.471993 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTAGGC GGGGAAGGAT CCGGTTCGCC ACGGTCTGGC TCGGTGGCTG CTCGGGGTGC 
CACATGAGCT TTCTCGATCT GGACGAGCGG CTCGTGGAGC TGGCCGGCCT GGCCGACATG
GTCTACGGCC CTTTTATGGA TGCGAAGGAA TTCCCCCGGA AGGTGGACGT GACCCTCGTG
GAGGGGGCAG TCACTAATCG GGCCAACCTG GCCATGGCCT TGATGCTGCG GGAACGGAGC
CGCATTGTCG TGAGCCTGGG CGACTGCGCC GTGACTGGCA ACGTGACGAG CCTGCGGAAC
CAACTGCCGG TGGCCGACGT CCTGGCAACC TTCCTGAGCT GTGGGGAAGG GAGCGTTCCC
GCCATGGACT ACAATGCAGT GCCGGAGCTT CTCCCCCGGG CGCTCCCCCT CCATCAGGTG
ATCGCGGTGG ACGGGTTTCT CCCCGGCTGC CCCCCGGACC CGGAGAGGAT CTGGACCGCC
ATCGGGTGCC TCCTGCGGGG GGAACCGGTT CATCTCGAAT CAGATATGCT CACCTTCGGA
TAG
 
Protein sequence
MGRRGRIRFA TVWLGGCSGC HMSFLDLDER LVELAGLADM VYGPFMDAKE FPRKVDVTLV 
EGAVTNRANL AMALMLRERS RIVVSLGDCA VTGNVTSLRN QLPVADVLAT FLSCGEGSVP
AMDYNAVPEL LPRALPLHQV IAVDGFLPGC PPDPERIWTA IGCLLRGEPV HLESDMLTFG