Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_1112 |
Symbol | |
ID | 3738605 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 1234934 |
End bp | 1235476 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637778390 |
Product | NADH ubiquinone oxidoreductase, 20 kDa subunit |
Protein accession | YP_384077 |
Protein GI | 78222330 |
COG category | [C] Energy production and conversion |
COG ID | [COG1941] Coenzyme F420-reducing hydrogenase, gamma subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 0.668315 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 0.471993 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTAGGC GGGGAAGGAT CCGGTTCGCC ACGGTCTGGC TCGGTGGCTG CTCGGGGTGC CACATGAGCT TTCTCGATCT GGACGAGCGG CTCGTGGAGC TGGCCGGCCT GGCCGACATG GTCTACGGCC CTTTTATGGA TGCGAAGGAA TTCCCCCGGA AGGTGGACGT GACCCTCGTG GAGGGGGCAG TCACTAATCG GGCCAACCTG GCCATGGCCT TGATGCTGCG GGAACGGAGC CGCATTGTCG TGAGCCTGGG CGACTGCGCC GTGACTGGCA ACGTGACGAG CCTGCGGAAC CAACTGCCGG TGGCCGACGT CCTGGCAACC TTCCTGAGCT GTGGGGAAGG GAGCGTTCCC GCCATGGACT ACAATGCAGT GCCGGAGCTT CTCCCCCGGG CGCTCCCCCT CCATCAGGTG ATCGCGGTGG ACGGGTTTCT CCCCGGCTGC CCCCCGGACC CGGAGAGGAT CTGGACCGCC ATCGGGTGCC TCCTGCGGGG GGAACCGGTT CATCTCGAAT CAGATATGCT CACCTTCGGA TAG
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Protein sequence | MGRRGRIRFA TVWLGGCSGC HMSFLDLDER LVELAGLADM VYGPFMDAKE FPRKVDVTLV EGAVTNRANL AMALMLRERS RIVVSLGDCA VTGNVTSLRN QLPVADVLAT FLSCGEGSVP AMDYNAVPEL LPRALPLHQV IAVDGFLPGC PPDPERIWTA IGCLLRGEPV HLESDMLTFG
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