Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_1109 |
Symbol | |
ID | 3738602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 1231882 |
End bp | 1232499 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637778387 |
Product | bidirectional hydrogenase complex protein HoxE |
Protein accession | YP_384074 |
Protein GI | 78222327 |
COG category | [C] Energy production and conversion |
COG ID | [COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 0.130681 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGACGCA CCAGCCGCTT TACCCTCCAA TCATCGGAAA TCACCCCCGA GAGCATCTCT CAGACCCCCT CTACTCCTAC AGAATTGACA TCCGATCCCC GTTTCCAGGC GGTGGAACGG ACCATCAAGC AGTTCCAGTG CCGGGCCGAC GCCCTCATTG AGGTGCTCCA CGTGGCCCAG GAGGCCTTCG GCTACCTGAG CGACGAGCTC ATGGCCCACG TGGCGAGGCA GTTGAAAATC CCCTTCAGCC AGGTCTACGG GGTCGCCACC TTCTACCACT TCTTTTCCCT TGAACCCCGC GGCGCCCATA CCTGCGTCGT CTGCACCGGC ACGGCCTGCT ATGTGAAGCG ATCCGCCGAG ATCCTTGTGC GCCTTGAGCA GGAGTTCAGG GTCAAGGCCG GCAAGACCAC CGAAGACGGT GGCCTCACGC TCTCCACAAT CCGGTGCCTT GGTAGTTGCG GCCAGGCGCC AGTCATGGTT CTTGACGGGG AGACGGTGGG ACAATGCACC CCCGATTCGG CCGTTGTCGC GGTAAAGGCG CTTCAGGAGA GCGGCCGGCC CCGGCCGAAC GATGAGGGAG GGGTGCGGCA GGAGGGGGGA GGGGGGAGAA CCCCATGA
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Protein sequence | MGRTSRFTLQ SSEITPESIS QTPSTPTELT SDPRFQAVER TIKQFQCRAD ALIEVLHVAQ EAFGYLSDEL MAHVARQLKI PFSQVYGVAT FYHFFSLEPR GAHTCVVCTG TACYVKRSAE ILVRLEQEFR VKAGKTTEDG GLTLSTIRCL GSCGQAPVMV LDGETVGQCT PDSAVVAVKA LQESGRPRPN DEGGVRQEGG GGRTP
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