Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_1082 |
Symbol | |
ID | 3741289 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 1204135 |
End bp | 1205553 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637778360 |
Product | two component, sigma54 specific, Fis family transcriptional regulator |
Protein accession | YP_384047 |
Protein GI | 78222300 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.820311 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.00000613253 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCTGATC AACAGACTTT TCCCATCCTG GTGGTGGACG ATGAGGAGGA AATCCTCTTC ACCACCAGCA TCACGTTGCG GAGCGCCGGC TTTCCCCCGG TGCTGACGGA AAGCGACAGC CGCAACGTCA TGGGAATCCT TGCCCGACAG GAGGTGGCCC TCGTTCTCCT GGACCTCTAC ATGCCGCACC TGCCGGGATA CGAGCTCCTG AAGGAGATCA CCGCGAACCA TCCTGAGATC CCGGTCATCG TGGTCACGGC CGCAAACGAG GTGGGAATGG CCGTGGAGTG CATGAAAGCA GGTGCGTTCG ACTATTTCGT CAAGCCGATG GAACCGCCGC GGCTCCTGGC AACAGTCAGG AGAGCGCTGG AGATGCACTC GCTCCGCTCC CAGGTGAATT CCCTGAGCAG CCACATCCTC ACCGGCGGGC TCGACAACGA AGAAGCTTTC GCCCCGATCA TCACCCGCAG TCGAAAGATG CACTCCATCT TCCAGTATCT GGAGGCGATT GCCCCCAGTA ACCAGCCCCT TCTGATTACC GGCGAGACGG GGGTCGGCAA GGAGCTTATC GCCCGTACCG TTCACAACAT CAGCGGCTGT AGGGGTCCCT TCGTGGCGGT CAACATCGCC GGCCTTGACG ACATGGTCTT CTCCGACACC CTGTTCGGCC ACCTCAAGGG GGCATTCACC GGTGCCGACC GGCAGCGGGA GGGTCTCATA GCCAAGGCAG CGGGCGGCAC CCTCTTCCTC GACGAGATCG GCGACCTGCA GCCGTCATCC CAGGTGAAGC TGCTCAGACT CCTCCAGGAG CAGGAATACT ACCCCCTGGG TGCGGACACG CCGGTCCACG CCGCCGCCCG GGTTGTCGTC GCCACGAACC GGGACCTGAA AGCGATAATG GCGGACGGAA GCTTCCGGAA AGACCTCTAC TACCGCCTGA GCGCCCATCA GGTTCTGATC CCCCCCCTGC GCGACCGGCG GGAGGATATC CCACTCCTGG TGGATCACTT CTTCGATGAG GCCGCGGCCT CCCTCTCCCG GCAGAAACCG ACGATCCCTC CGGAACTCGC CTGTTACCTC GGCACCTACG CGTTTCCGGG CAACATTCGA GAGTTGCGGG CCATGGTTTT CGACGCCATG GCCCGCCATG AAAAAGGGGT GCTTTCCCTG GCCGGCTTCA GAGAGGTGAT CGGCAATCCT CGCTCCCCGG CTGAAACATC TCCCCTTCCC TTCATTGAAG GACTGAGGGA AGAGTCCGGC AATGCCGGCC GCATGCCGAC CCTGAAGGAG GCGGAGGATG CCCTTATCGC CCATGCCCTG AGCATCGCCA ACGGCAACCA GGGGATAGCC TCGGCCCATC TGGGGATAAC CCGCCAGGCC CTCAACAAGC GCCTCAACAG AAAAACCGCC GACGAATAA
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Protein sequence | MPDQQTFPIL VVDDEEEILF TTSITLRSAG FPPVLTESDS RNVMGILARQ EVALVLLDLY MPHLPGYELL KEITANHPEI PVIVVTAANE VGMAVECMKA GAFDYFVKPM EPPRLLATVR RALEMHSLRS QVNSLSSHIL TGGLDNEEAF APIITRSRKM HSIFQYLEAI APSNQPLLIT GETGVGKELI ARTVHNISGC RGPFVAVNIA GLDDMVFSDT LFGHLKGAFT GADRQREGLI AKAAGGTLFL DEIGDLQPSS QVKLLRLLQE QEYYPLGADT PVHAAARVVV ATNRDLKAIM ADGSFRKDLY YRLSAHQVLI PPLRDRREDI PLLVDHFFDE AAASLSRQKP TIPPELACYL GTYAFPGNIR ELRAMVFDAM ARHEKGVLSL AGFREVIGNP RSPAETSPLP FIEGLREESG NAGRMPTLKE AEDALIAHAL SIANGNQGIA SAHLGITRQA LNKRLNRKTA DE
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