| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1072 |
|---|
| Symbol | |
|---|
| ID | 3739519 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 1193442 |
|---|
| End bp | 1194476 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637778350 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_384037 |
|---|
| Protein GI | 78222290 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
|---|
| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03640] CRISPR-associated endonuclease Cas1, DVULG subtype |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 61 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.0131411 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAGA TCCTCAACAC CCTCTACGTC ATGACCCAGG GGGCCTATGT CTGCCTCGAC
CACGAAACGG TGAAGGTGGA GGTGAAGGGC GCACTCCAGA TGCAGGTGCC GCTTCACCAT
CTGGGGGCCA TCGTCACCAT GGGGAACGTC ATGATGAGTC CCTTCATCAT GGCGCGTTGT
GCCGAGGACG GCCGGGCGCT GGTGATCCTC GACCGTAACG GCAAGTTCAA GTGCCGCGTC
GTCGGCAAGA CCAGCGGCAA CGTGCTCCTG CGCCAGACCC AGTACGAGGC GGTGCGGGAT
AGGGAGCGCT CCGCGGCAAT CGCCCGGAAC ATGGTGGCGG GGAAGGTTAA GAATGCCCGC
CAGATCCTCA TGCGGGGAGC GCGCGAAACC ACCGACGCTG ATGAAAGCGC CGTCCTGCGA
AAAGCGGGCG ACACCCTGGC CGATGCGCTC TTCCATCTCA AGGACGCGAC GGATATCGAC
CATGTGCGCG GATTGGAGGG GGAGGCGGCC AACGCCTATT TCCAGGTGTT CGACCGGATG
GTGAAGGAAG AGGAGCGCCC GGCCTTCAGG ATGAACGGCC GCAACCGCCG GCCTCCGCTC
GATCCCATGA ACGCACTTCT CTCCTTCCTC TATACGCTGC TTCTCAACGA CTGCATCAGC
GCCGTAGAAG GAGTGGGGCT CGATTCCCAG ATGGGCTTTC TTCATGTCCT ACGTCCGGGG
CGGCCTTCCC TCGGGCTCGA CATCATGGAA GAATTCCGAG CGGTGCTGGC GGACCGGCTG
GCCCTTACCC TCATCAACCG GAAGCAGATC ACTGAAAAAC ATTTCGAGGT GCGGCCCGGC
GGGGCCACCT ATCTGGACGA TGCGGGCCGG AAGGAAGTCA TCATGGCCTA TCAGAAGCGG
AAACAGGATG AATTTCACCA TCCGGTCCTC GACCAGAAAG TTCCCTTCGG GCTCTTACCC
CACGTTCAAG CCCGGCTGCT GGCCCGGCAT CTGCGGGGGG ACCTGGAGCA GTACACGCCG
GTGCTCTATT CATAG
|
|---|
| Protein sequence | MKQILNTLYV MTQGAYVCLD HETVKVEVKG ALQMQVPLHH LGAIVTMGNV MMSPFIMARC
AEDGRALVIL DRNGKFKCRV VGKTSGNVLL RQTQYEAVRD RERSAAIARN MVAGKVKNAR
QILMRGARET TDADESAVLR KAGDTLADAL FHLKDATDID HVRGLEGEAA NAYFQVFDRM
VKEEERPAFR MNGRNRRPPL DPMNALLSFL YTLLLNDCIS AVEGVGLDSQ MGFLHVLRPG
RPSLGLDIME EFRAVLADRL ALTLINRKQI TEKHFEVRPG GATYLDDAGR KEVIMAYQKR
KQDEFHHPVL DQKVPFGLLP HVQARLLARH LRGDLEQYTP VLYS
|
|---|
| |