Gene Gmet_1058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1058 
Symbol 
ID3739505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp1175618 
End bp1177006 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content65% 
IMG OID637778336 
Producttwo component, sigma54 specific, Fis family transcriptional regulator 
Protein accessionYP_384023 
Protein GI78222276 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.0191246 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAC GCATTCTCAT TTGCGACGAC GAGGAAGGGA TCAGGCGCTA CCTCCAGAAG 
ATGTTCCTGG CCAAGGAGTA CGATGTGGAA ACCTTTGCCG ACGGAACGAG CCTTCTGGCA
CGTATTGAGG GGGGAACGGA GGGTGATGCC GACATCCTCC TTCAGGACGT GCGGATGCCG
GACATGGACG GGATCGAGGT GCTGAAGCGG GTGAAGAAGC TCCGGCCGGC CATGCCGGTG
GTGGTGATGA CCGCCTTCGG CACCATCGAC GCGGCCGTGG AGGCGATCAA GCTGGGGGCC
TACGACTACG TCACCAAGCC GTTCCCCAAG GAGAAGATCC TCGGCCTCAT GGAGAACGCC
CTCCAACTGG ACCTCCTCAT GAAGGAGAAC CGGGTGCTGA AGGAGGAGCT CTCCCGCCCC
GACATCCCCG ACAACATCGT CTTCACCAGC GCGAAGTTCC GGGAGGTCTA CGACCTCACG
GTCCAGGTGG CCGGCAGCGA CGCCAACATC CTGGTCCTCG GCGAATCGGG TACCGGCAAG
GAGCTTATCG CGGGCGCGAT CCACGTGAAC AGCCAGCGCA AGGGGCGGCG CTTTCTCTCC
ATCAACTGTG CGGCCCTGTC TGACACGCTC CTGGAGAGCC AGCTCTTCGG CCACGTGCGC
GGTGCCTTCA CCGGCGCCAT CACCACCCAG AAGGGGCTCC TGGAGGAGGC CGACGGCGGC
ACCCTCTTCC TGGACGAGAT CGGCGATGTC TCCGCCGCGG TTCAGGCGAA GCTGCTGCGG
GTCATCCAGG AGCGGGAGTT CATCCCCGTG GGGGCCACCA AGCCCAAGAG CGTCGACATC
CGCTTCGTGG CCGCCACCAA CAAGGATCTG GCCAAGGAGG TCGCGGCCGG ACGATTCCGG
GAGGACCTCT ACTACCGGCT CAACGTCATC ACCATCGCCC TCCCCCCTCT GCGGGAGCGG
CGCGAGGACA TCGAGCCCCT GGCCATGCAC TTCCTTGCCA AGTATGCCCG CCGCATCCGG
AAGAATATCC GCGGGTTCAC GCCCGAGGCG CTCCAGTCCC TCCAGGGGTA CCGCTGGCCC
GGCAACGTGC GGGAGCTGGA AAACGTCGTC GAGCGGGCCG CCATCCTCAC CCGGGGCGAC
CTGGTCACTC CCGAAGTCCT CCCCATCCGC CCCCGGGAGG ATGCGCCACT TCTCCGGCCG
GACAACCTGC TCGTTTCCCT GGAGGAGATG GAGCGGGAGC ACATCGAGCG GGTCTTGCGC
CAGACAGGCT TCCACAAGAG CCGCACGGCG GAGATCCTCG GCATCTCCCG CAAGACCCTC
GACCGCAAGA TCGTGGAGTA TGCCCTCGCC ATCCCCGGCC AAGGGATCTC CGGAACCCTG
GACGACTGA
 
Protein sequence
MKARILICDD EEGIRRYLQK MFLAKEYDVE TFADGTSLLA RIEGGTEGDA DILLQDVRMP 
DMDGIEVLKR VKKLRPAMPV VVMTAFGTID AAVEAIKLGA YDYVTKPFPK EKILGLMENA
LQLDLLMKEN RVLKEELSRP DIPDNIVFTS AKFREVYDLT VQVAGSDANI LVLGESGTGK
ELIAGAIHVN SQRKGRRFLS INCAALSDTL LESQLFGHVR GAFTGAITTQ KGLLEEADGG
TLFLDEIGDV SAAVQAKLLR VIQEREFIPV GATKPKSVDI RFVAATNKDL AKEVAAGRFR
EDLYYRLNVI TIALPPLRER REDIEPLAMH FLAKYARRIR KNIRGFTPEA LQSLQGYRWP
GNVRELENVV ERAAILTRGD LVTPEVLPIR PREDAPLLRP DNLLVSLEEM EREHIERVLR
QTGFHKSRTA EILGISRKTL DRKIVEYALA IPGQGISGTL DD