| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1046 |
|---|
| Symbol | |
|---|
| ID | 3741331 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 1161195 |
|---|
| End bp | 1162358 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637778324 |
|---|
| Product | Iron-containing alcohol dehydrogenase |
|---|
| Protein accession | YP_384011 |
|---|
| Protein GI | 78222264 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1454] Alcohol dehydrogenase, class IV |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.0545646 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.000000369007 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCACTGG CAGATCAGAC TTTCGGATTC TTCATTCCCA CCGTTACGCT CATGGGGGTC
GGCTCCTCCA AGGAGACCGG CGCGCAGGTA AAGGCGCTGG GCGCCCGGAA GGCGCTCCTG
GTGACCGACA AGGGGATCTC GGCCATGGGG ATGGCCGACC AGATCAAACA GCAGGTTGAG
GCTGCCGGCG TCGCGGTCGT CATCTTCGAC GGCGCCGAGC CGAACCCCAC CGACACCAAC
GTCCACGACG GCGTCAAGGT CTATCAGGAG AACGGCTGCG ACTCCATCAT CTCCCTCGGC
GGCGGCAGCT CCCACGACTG CGCCAAGGGG GTGGGCCTCG TGATCGGCAA CGGCGGCCAC
ATCCGCGATT TCGAAGGGGT TAACAAATCC ACGAAGCCGA TGCCCCCCTT CGTCGCCATC
AACACCACTG CCGGCACCGC CTCGGAGATG ACCCGCTTCT GCATCATCAC CAACACTGAC
ACCCACGTGA AGATGGCCAT TGTCGACTGG CGCTGCACCC CGAACATCGC CATCAACGAC
CCGGTCCTCA TGCTCGGCAA GCCCGCGCCC CTCACCGCCG CCACCGGCAT GGACGCCCTC
ACCCACGCGG TCGAGGCCTA CGTCTCCACC ATCGCCACCC CCATCACCGA CGCCTGCGCC
CTCCAGGCCA TCAAGCTGAT CGCCGAGTAC CTGAGCCCGG CCGTGGCTAA CGGCGACAAC
CTGGAAGCCC GGGACCGGAT GGCCTACGCC GAGTACCTGG CCGGCATGGC ATTCAACAAC
GCGAGCCTCG GCTACGTCCA CTCCATGGCC CACCAGTTGG GGGGCTTCTA CAACCTCCCC
CACGGGGTCT GCAACGCCAT CCTGCTGCCG GCGGTTTCCG AATTCAACGC CATCGCCTGC
CCGAAGCGGT ACGCCGACAT TGCCGTGGCC CTGGGCGAAG ACATCACCGG CCTTGCCCCC
CTGGATGCCG CCGCCAAGGC CATTGCCGCC ATCCGCAAGC TCTCGGCGGC CATCGGCATC
CCGGCCGGCC TCAAGGAGCT GAACGTGAAA GAAGAGGACC TGAAGGTCAT GGCCGAGAAC
GCCAAGAAAG ACGCCTGCCA GCTGACCAAC CCGCGCAAGG CGACCTTGGA GCAAGTGATC
GGCATCTTCA AAGCGGCGAT GTAG
|
|---|
| Protein sequence | MALADQTFGF FIPTVTLMGV GSSKETGAQV KALGARKALL VTDKGISAMG MADQIKQQVE
AAGVAVVIFD GAEPNPTDTN VHDGVKVYQE NGCDSIISLG GGSSHDCAKG VGLVIGNGGH
IRDFEGVNKS TKPMPPFVAI NTTAGTASEM TRFCIITNTD THVKMAIVDW RCTPNIAIND
PVLMLGKPAP LTAATGMDAL THAVEAYVST IATPITDACA LQAIKLIAEY LSPAVANGDN
LEARDRMAYA EYLAGMAFNN ASLGYVHSMA HQLGGFYNLP HGVCNAILLP AVSEFNAIAC
PKRYADIAVA LGEDITGLAP LDAAAKAIAA IRKLSAAIGI PAGLKELNVK EEDLKVMAEN
AKKDACQLTN PRKATLEQVI GIFKAAM
|
|---|
| |