Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_0996 |
Symbol | |
ID | 3738100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 1109967 |
End bp | 1111022 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637778275 |
Product | ABC transporter, substrate-binding protein, aliphatic sulphonates |
Protein accession | YP_383963 |
Protein GI | 78222216 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
Num covering plasmid clones | 67 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 0.822454 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCGGAG CTATTGGATG GGAAAAAGCG ATAAAATCGG GCCGGGTGTG GGGAGCTTTC CTTCTCTGCC TGCTCCTTGT GCCCTGGTCC CAGTCCCACG CAGGGGCCAA GCGGCTCCGG TTGGGGTATT TTCCGAACAT TACCCATGGG CAGGCCCTCT ACGCGCGGGC AACCGGCGAA CTGGAGAAAA TGATGGGCGT CCCCATCGAG TGGATCCCCT TCAATGCCGG GCCGTCGGTC ATCGAAGCCC TGTTCGTCGA TGCGCTTGAT GCCGCGTTCA TCGGCCCCAG TCCGACGATC AACGGGTACA TAAAGTCCAA GGGGGAGAAA TTCGTCATTG TGGCGGGCGC TTCCAGTGGC GGAGCAGGGC TGGTGGTGCG AAAGGATTCG GGAATCGGGG GGGAAAAGGA TTTTCACGGC AAGGTCATCG CCACGCCGCA ACTGGGCAAC ACGCAGGACC TCGCCGCCCG TGCCTGGTTC GCAGCCAAGG GGTACAGGCT CAAGGAAACG GGAGGGACGG TTTCATTGGT TCCCCTTTCC AACCCTGATC AACTGACCAT GTTCAAGAAA AAGCAGATTG ACGGGGCCTG GACCATCGAG CCGTGGCTCT CCCGTCTGGA ACTGGAGGGT GGGGGCCGTC TCTTTCTCGA TGAGAAAAGC CTCTGGCCCG AGGGACGCTA CGTGACCACC CATCTGGTCG TGCATAGAAA ATTTCTGGCC GAGAACGAGG AGCTGGTGAA AAAGCTGCTG ACGGCCCATG TGGAACTCAC CCAACGGATG AATGCCGACA AGGTGGCAAC CGCCAGGCTC CTCAACGGGC AACTGAAGAA AGACACAGGC AAGGAGTTGG AAGGCGAGGT CATCAGCCGG GCCCTCAGTC GTGTGGAATT TACCTGGGAT CCCATCGCCC CGTCCATGGC GAAATTGGCT GAAATCGCCC ATAGGATAAA ATTTCTCAGG ACAAGTCCCC GACTTGACGG AATCTACGAG CTCAACCCCT TGAATGCGGT GTTACGGCAG AAGAACCTGC CCGAGGTGAG TGATGGAGTT CGGTAA
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Protein sequence | MAGAIGWEKA IKSGRVWGAF LLCLLLVPWS QSHAGAKRLR LGYFPNITHG QALYARATGE LEKMMGVPIE WIPFNAGPSV IEALFVDALD AAFIGPSPTI NGYIKSKGEK FVIVAGASSG GAGLVVRKDS GIGGEKDFHG KVIATPQLGN TQDLAARAWF AAKGYRLKET GGTVSLVPLS NPDQLTMFKK KQIDGAWTIE PWLSRLELEG GGRLFLDEKS LWPEGRYVTT HLVVHRKFLA ENEELVKKLL TAHVELTQRM NADKVATARL LNGQLKKDTG KELEGEVISR ALSRVEFTWD PIAPSMAKLA EIAHRIKFLR TSPRLDGIYE LNPLNAVLRQ KNLPEVSDGV R
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