| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0994 |
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| Symbol | |
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| ID | 3738098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 1103862 |
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| End bp | 1107290 |
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| Gene Length | 3429 bp |
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| Protein Length | 1142 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637778273 |
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| Product | SNF2-related:helicase-like:Zinc finger, SWIM-type |
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| Protein accession | YP_383961 |
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| Protein GI | 78222214 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.424079 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGCAC GACCCGGCGC CGCCAGGGAG CGGATACGTT CGACCGCGGC ACCTGCCGTC
GGCGAAAAGG TGCTCAATGC CCTGCGGGAC CTGCCGGCGG GAATGATCTA TACCCTGGGC
GCCAAGCCCA CCGTGCTGCG GGGGCTCGCC CTTGCCATCG AAAAGCGGGT GAAGGGAATC
GACTGGAGTC CCGACGGTGC CACCCTCTTT GCCGAAGTCA TGGACGGAAG CCGCCACCAC
GAGGTGCGCC TGGAGGCGAA CGGAGGCTTC CTCACCCCCT CCTGCGACTG CCCGCTCTGG
CGCCCCACCG GCCACTGCCC CCACGTCATC GCCGCCCTGG CGGTACTGAA AAAGGGGCTG
GTGCATCAGG CGATTACCAG TCTCCGGCTC GACAGCGACT ACCTGGCCGA GGTGAGCGGC
TGGCTTTCGG GCGTTGAGGC CGCGCAACCG ACCGCGCCGG CCGTGCCGCG CCTGGTGGTG
GAGCGGGGCG CCGACGGCAT CCAGGCGCGG ATATGGCTCG GGGAGCATCC CGTCTCCATC
CATGACCAGG CGCTCCCCCG GACGGTGCGG GATTTCCTCT GGACCCTCCT CAATCCCCGG
GAGAGCGGTT TCATCATCGA GCGCTACCTG GAGGCCTTTG GCGACGACGC CCCCATGGCC
CTGCGCCAGG ATGACAATGA GATACCCCTG CGCTTCGATC GGGGGAGGGT CCACGGCACC
CTGACCCTTC TGGAGCAGGT CCGCGGCATG GTCATTGCCC GCAAGGGGCT GGAGGACGGC
CATCCCATTC CGGACACCTG TTTTGCCGCC TACCGTTACT ATTTCGACAT CCCTGCCGGT
GCTGTCCGGG TCATCGACTC CTTCGAGGGG TGGGATCTCT GGAACACCAT CAACTACGAG
GCCGCCGAAT GGAGCCTCGA CACCGGCGTT TCCGTCGAGC GCAATTCCCG GACCATCTCC
CTTCCTGCCG ATGCCTTCAA CGCCATCGGG CTGACCGTCA CCGAGAAGGG GCTTCCCACG
ATCCTCGAAC GCATCCGGTT TTACGGTGCC GGCGGACCGG GCGAACCAGC ACGGATCACC
CACAACTACC GCCTGCGGGT GGCCGACATG AACGACACCA CCGCCCTGCT GCTGGCCGAG
GGGGTCTACG GCGACGCGGC AATTCCCCTT TCCGCCGGCG CCTTCAGCTT TTTCACCAGC
CGGGGCCGGT CCACGGCATC GGTTCCCCTG AGGACCAAGA AGCGGAGTAG CGCGGTGATC
GCCGGTTGCT TCGCAGCCCT TGACTGCGTC ACCAGGGCCG AACTGGAGCG GACCATCAGG
CACGCCCTTG CGGGCGACGA CTTCCTGAAA CGCACTGTGA AGAGCGAGGC GAAGCGGATC
ATCACGGCGT TTGCCGCGGC CTGCGAAACC CGCGAAACGA CGCTCCTGGC GGCCGATGGC
GCCTGGCTCA TATCCGTGGC CGAACCGAAG GTGGAGGCGC AACTCCTGGA GATCCCCTAC
CGGCTCTTCG GTGCCGAAAT CTTCGGCTCG TCGGACCTTG CCGGCGCCAT GACCGTCAAC
CGCGACGCGC TCTTTCGCCA ATTTCCCGCA CTTCACAACC GTCTTGCGGA GGCTGGGTTC
GACCTGGTGC TCCAGGACCG CCCGGTGGAG GCTGTCACCC TCGATGTGAC CCTCGACGCC
ACCCGGTCCA CCCTGGACTG GTTCGAGCTC CGCCCCGAGA TCCGCTGCGG CACCGGCGAG
CTTACCGAAC AGGAGATCGC CGAGGCCATG GCCAGCGGCG GCGTCTTCCG CCGGGGCGAT
TCCTTTCTCC TCATCAACGA GGAATCGTCC CGCATCCTGG CCATGCTCTA CCCCGAGGCC
GGGGTGAAGA AGCGGAGGAA GGCCGAGGTG GTCCGCATCC CGCGGCTCCA GATCCTCGAC
TGGCTCGTCC TGCGGCACCA TGGGGTCTCG GTTCGCCTCT CCCCCGAGGA TGAGAGGATC
TTCGCCAGCC TCGCCACCTT CGAAGAGATA CCTTCATCCC CCCTCCCCGA AAGGCTCCAG
GCGACCCTGC GTCACTACCA GGTGGACGCC TTTCATTGGC TCGCCTTTCT CTACACCCAC
CGCTTTGGCG CCTGCCTCGC CGACGACATG GGGCTCGGCA AGACCATCCA GGCCATCAGC
CTTCTGGCGG CGCTCCACGA GGGGACGCTC CCCTCGCGGG TGCCGGAGCC GCGTCCTCAC
CTCATCGTCG TTCCCCCGAG CCTCCTCTTT AACTGGGAGA ACGAGTTGGC CCGCTTCTAC
CCCGCATTCA CCGTCCTTAC CTATCGGGGC ACCGGCCGCA GCGCCGACTT CACCGGGGTC
GACATCGTCC TCACCAGCTA TGGCATCATC CCCCGTGATA TTGGGATCCT GGCGGAGATT
CCTTTCCACT GCATCGTCTT CGACGAGGCC CAGGCCGTGA AAAACATCCA GGCCGACACC
ACCGGCGCCT GCCGCCGGCT GCGGGGCGCG TTCACCCTCT GCCTCACCGG CACCCCGGTT
GAAAACCACC TCGGTGAGTA TTTCTCGGTC ATGGACCTGG CCGTGCCGGG GCTTCTGGGC
TCCTACGAGG AATTCCGGCG CCAGGCCGGC AACGCCGCGG CTCCCTTCCT CGAAACCCTT
GTCCGGCGCA CCCGCCCCTT TGTCCTGCGC CGCTCCAAGC AGATGATCGC CGCCGAGCTT
CCCCCCAAGA TCGAAACCGA CATCTACCTG GAGCTGACTC CCCGGCAGAA GGCCCTCTAT
ACCCGCACCG TCGAAGAGGT ACGCGAGACC GTGCTCGAAG CGTGGCGCGG CAAGTCACCC
GGCCAGGCGC GTATCATTGC CCTCACCGCC ATCCTGCGGC TGCGCCAGCT CTGTCTCTCC
CCCCGGCTCC TCATTGCCGA CTCCAGGGAA CCGTCCCCCA AGGTGGAGTT CCTCGTGGAG
CAGCTGGAAG AACTCTTTAC CGAGGGGCAT AGTGTTCTCG TCTTCTCCCA GTTCACCTCT
TTTCTCGACA TCGTCGAAGG AGAACTGTCC CGCAGGGGGG TTCACTACTA TCGCCTCGAC
GGCTCCACTC CGGTCCCCGA ACGGAAAAGA CTCGTCACCG CCTTCCAGAA GGGCGATGAG
CCGTCCGTCT TCCTCCTCTC CCTGAAGGCC GGTGGCAAGG GGCTCAACCT TACCCGCGCC
ACCTATGTCT TCCATCTCGA TCCCTGGTGG AACCCCGCAG TGGAAAACCA GGCCTCTGAC
CGGGCCCACC GTATCGGCCA GACACGCCAG GTCACCATCA CCCGCCTTGT CATGCGCCAC
ACCATCGAAG AGAAGATGAT GGAACTGAAA AAGCGCAAGC TCAAGCTCTA CCATGCCCTT
TTGGAGGAGA ACTCCGCAGG GGACGGGGGA GGCATCAGCC GGGAGGATTT CGAGTTCCTG
CTGGGGTAG
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| Protein sequence | MPARPGAARE RIRSTAAPAV GEKVLNALRD LPAGMIYTLG AKPTVLRGLA LAIEKRVKGI
DWSPDGATLF AEVMDGSRHH EVRLEANGGF LTPSCDCPLW RPTGHCPHVI AALAVLKKGL
VHQAITSLRL DSDYLAEVSG WLSGVEAAQP TAPAVPRLVV ERGADGIQAR IWLGEHPVSI
HDQALPRTVR DFLWTLLNPR ESGFIIERYL EAFGDDAPMA LRQDDNEIPL RFDRGRVHGT
LTLLEQVRGM VIARKGLEDG HPIPDTCFAA YRYYFDIPAG AVRVIDSFEG WDLWNTINYE
AAEWSLDTGV SVERNSRTIS LPADAFNAIG LTVTEKGLPT ILERIRFYGA GGPGEPARIT
HNYRLRVADM NDTTALLLAE GVYGDAAIPL SAGAFSFFTS RGRSTASVPL RTKKRSSAVI
AGCFAALDCV TRAELERTIR HALAGDDFLK RTVKSEAKRI ITAFAAACET RETTLLAADG
AWLISVAEPK VEAQLLEIPY RLFGAEIFGS SDLAGAMTVN RDALFRQFPA LHNRLAEAGF
DLVLQDRPVE AVTLDVTLDA TRSTLDWFEL RPEIRCGTGE LTEQEIAEAM ASGGVFRRGD
SFLLINEESS RILAMLYPEA GVKKRRKAEV VRIPRLQILD WLVLRHHGVS VRLSPEDERI
FASLATFEEI PSSPLPERLQ ATLRHYQVDA FHWLAFLYTH RFGACLADDM GLGKTIQAIS
LLAALHEGTL PSRVPEPRPH LIVVPPSLLF NWENELARFY PAFTVLTYRG TGRSADFTGV
DIVLTSYGII PRDIGILAEI PFHCIVFDEA QAVKNIQADT TGACRRLRGA FTLCLTGTPV
ENHLGEYFSV MDLAVPGLLG SYEEFRRQAG NAAAPFLETL VRRTRPFVLR RSKQMIAAEL
PPKIETDIYL ELTPRQKALY TRTVEEVRET VLEAWRGKSP GQARIIALTA ILRLRQLCLS
PRLLIADSRE PSPKVEFLVE QLEELFTEGH SVLVFSQFTS FLDIVEGELS RRGVHYYRLD
GSTPVPERKR LVTAFQKGDE PSVFLLSLKA GGKGLNLTRA TYVFHLDPWW NPAVENQASD
RAHRIGQTRQ VTITRLVMRH TIEEKMMELK KRKLKLYHAL LEENSAGDGG GISREDFEFL
LG
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