Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_0967 |
Symbol | |
ID | 3738208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 1075357 |
End bp | 1078449 |
Gene Length | 3093 bp |
Protein Length | 1030 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637778246 |
Product | type IV pilin biogenesis protein, putative |
Protein accession | YP_383934 |
Protein GI | 78222187 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3419] Tfp pilus assembly protein, tip-associated adhesin PilY1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGACGA GCAGGCTCTT TAAAAAGATC ATGCGGATGC TTTCCGTTCC GGTCACCATC GCCCATCTCG CTGCGGCCCC GGGTATCGCC AGGGCCGATG ACACCGAAAT ATATTCTGCC GGAGCCACCA TGAAGCCGAT GGTGATGATC ATTATGGACA ACTCCGGCAG CATGGGCGAC CCGGTCCCCT ACGACAACGC CACGGCCTAT GCCGGAACAT ACACGAAAGA CACCGTCTAC CAGTATACGT GCACGGCGCG AAACAAGAAG GGGCAGTGCA CGGCAACCCA GTGGCAGGTG TATACTGGCG TCTTTACCGA TCAGATAAAC CGGGATGGCG GCGTTGACGT TGCTGGTCAG GACGGGATCG ACGACAGTAG CACCGCGCTC AAGACCGGCA ACCGTCTCAA CTACGAGGCG TTGCCCACCA CCAGCAAGCT GAGCACGGCC AAGGGGGTGC TCAATAACCT GGTCGATCTG ATGTACAATG ACGTCGATTT CGGGTTCATG AAGTTCAACA CCGAGGACGG CGGCAACATC ATCTCGAAAA TTGGCGCCAC CATTACCGCC ATGCATGGCC AGATCAGCGC CATCAACGCC ACCACCTGGA CTCCTCTCGC AGAGGCGCTG ACCGATGCCG GTAAGTATTT CGAGGACACC TATACCGGCC AGTACAGCCC CTGGAATTCT AATAACTGGT GCCAGAAAGC CTTCATCATC ATCGTCACCG ATGGTGAACC AACCCACGAT ACCGACACAA CCATCATCGG CCATTTTCTC GACCGCGGGC AGACGGGAAT CACCGACGCC AACCGGGGGC AGAAATGGGA CCAGGACGGT GACTACAATA TGCACAGCAC TACCACCACC GATCCCCTCA ATAACGACGT CTGGGTCGCC GACGATACAT ACAGTGACAC GGTCCCCCAG ACGTTTCTCG ATGATGTGGC CAAGTATCTC TATACCCACG ATCTTCGTCC CGACCTGCAG GGAACCCAGA ATGTAACGAC GTACACCATC GGCTACGCCC ATGACAGCCC CCTGCTGCAG AGAACCGCCC AGAACGGAGG GGGGCTGTAC TTTACCGCTA ACAACGCCGC GGAGTTGGAG CACAGCCTCC TCATGGCCCT GGACGACATC GCCAAAAAGC TTCAGACCTA TACCGCTCCG GTCGTTCCCA TAACCCGGAC CTCAAGCGGC GACAAGATGT ATCTGGCGTT CTTCAAGCCG CTGGCTTACT CCAAGTTCTG GGTCGGCGAC CTCCACAAAT ACGGGCTGTC CAGTTCCAAT CAGATCATCG ACAGTGCTGG CAACCAGGCC ACGGATTCAT CGGGAGCCAT GCTCGACACC GCCGTTCCGT ACTGGAGCGT ATCGTCACTG CTGAAGAGCC GGTCTACCGC CCGGAACATC TACACCTACC TCGGGACCAA CAGTAACCTC ACGGACAGCT CCAATGCCTT CACGATCGCC AACACCGCCT TGACGGCCGC CGTACTCGGC AATCCGGCCA AGAGCAACGC AGCCAACGCT GCCACCGCAG CCCGCGACGA CCTGATCAAC TACATACACG GCCAGGACGC CTATGATGAC AATGGCAACC TGAACTGGAC CGAAAAGCGG GACTTCATTC TCGGTGATAT CCTCCACTCC GTGCCGCTGG TGGTGGACTA CAACGGACCG ACGGCCACCG ACCCGAACCG GCACATTTTC TTCGGCTCCA ACGACGGGAT GCTCCACTGC ATCAATGATG CGAACGGAAG CGAAGAGTGG GGCTTCGTGC CTCCCGACGC GCTTCCCCGC CTGAAGCTCT TTGAAGAGGG AAGCTCTCAC CCGTATTTTG TCGATGGTTC CGTAAAGCTC TACCAACTGC GGAACTCGGC CGGTGTCATC ACCAAGGCGA TCATCATCTT CGGGCAGCGG GCCGGAGGCG ACAACTACTA CGCCCTTGAT GTCACCAATC CCGCGTCGCC ACAATTTCTT TGGAGAATCA ACGGTTCATC CACCGGCTTC TCTGAAATCG GCCAGACCTG GTCAGAACCG CTGATAGCCA AAGTGAAGAA AAATGACAGC AACGGGGTGC CAGTCACCTA TGATGCCGTT ATCTTCGGTG CCGGCTTCGA CTCGGCTCAG GCTAACACCA AGGCTGTCGC CGCTGCCGCC AAGGGGCGCG GAGTATTCAT CGCCAACCTG CTCACCGGTG AGTTGATAAG CAGCTTCAAA TACACAACCA GCAATGGAAT GAACTATGCC ATTCCCAGTA ACGTAGCCGC CGTGGACATG GACTCCAATG GGATTGTCGA CCGGATATAT GTGGGGGACC TGGGGGGCAA TCTTTGGCGG ATTGGGAAGT CGCCCAACAG TACTGACCCC ACTGATGCCC AGAAAGACAT CAACCTCATC GATAACTGGG GAATCCGCAA GCTCTTTGCC TCCAACCCGG GAGCCGACGG CAGTTCGGGG CGGAAAATTT TCTATCAGCC CGAGATAGCC TTGCAGTCGG GGCATAACTA TGTTTACTTC TCTACTGGAG ACCGGGACAA CCCCCGTTCG ACGGATGCCG TGGACCGGCT TTACGGGGTG AAGGACACCA GCCCCGATCA GAGCGTGTTC GCCACCCTTA CGGAAAACAG CCTGACCAAT CAGACAGGTG TGGTAAGCAG TTCTATCTTG CCCCTGACAA CAAGTGGCTG GTATGTTCGG CTCATAGCGG CTGCTGGCGA GAAGTCGCTG GCTGCGCCGG TCCTCTTCAA CAAGTATGTA CTGTTCGATA CCTTCCTTCC CAATAATGCC CTCTGTGATA TCGGTGGCGG GGCAAAGGTT TACGCCGTAA GCTACCTGAA TGGCCTCTAT TCGCGTTACA GTCTCGGCAA CGGCATACCC ACCGAGGCTG TACTGGTCGT CCGCCCGACG GGAACCACGG CTTTTGTCGG AGCCGGCGGC GGGGTCATTA ATCTGTTAAA CCTCATCCCT GATTCGCCTC CCACAGGTGG GGGAGGTGGC GGGGGAGATG GGAGTGCCAA CCAGAAGCCA ATACAAGAGA TTTTCAATTT CGTGACCGGT ATCATACCCA TTTCATGGCG AGAGGTGTTC TGA
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Protein sequence | MLTSRLFKKI MRMLSVPVTI AHLAAAPGIA RADDTEIYSA GATMKPMVMI IMDNSGSMGD PVPYDNATAY AGTYTKDTVY QYTCTARNKK GQCTATQWQV YTGVFTDQIN RDGGVDVAGQ DGIDDSSTAL KTGNRLNYEA LPTTSKLSTA KGVLNNLVDL MYNDVDFGFM KFNTEDGGNI ISKIGATITA MHGQISAINA TTWTPLAEAL TDAGKYFEDT YTGQYSPWNS NNWCQKAFII IVTDGEPTHD TDTTIIGHFL DRGQTGITDA NRGQKWDQDG DYNMHSTTTT DPLNNDVWVA DDTYSDTVPQ TFLDDVAKYL YTHDLRPDLQ GTQNVTTYTI GYAHDSPLLQ RTAQNGGGLY FTANNAAELE HSLLMALDDI AKKLQTYTAP VVPITRTSSG DKMYLAFFKP LAYSKFWVGD LHKYGLSSSN QIIDSAGNQA TDSSGAMLDT AVPYWSVSSL LKSRSTARNI YTYLGTNSNL TDSSNAFTIA NTALTAAVLG NPAKSNAANA ATAARDDLIN YIHGQDAYDD NGNLNWTEKR DFILGDILHS VPLVVDYNGP TATDPNRHIF FGSNDGMLHC INDANGSEEW GFVPPDALPR LKLFEEGSSH PYFVDGSVKL YQLRNSAGVI TKAIIIFGQR AGGDNYYALD VTNPASPQFL WRINGSSTGF SEIGQTWSEP LIAKVKKNDS NGVPVTYDAV IFGAGFDSAQ ANTKAVAAAA KGRGVFIANL LTGELISSFK YTTSNGMNYA IPSNVAAVDM DSNGIVDRIY VGDLGGNLWR IGKSPNSTDP TDAQKDINLI DNWGIRKLFA SNPGADGSSG RKIFYQPEIA LQSGHNYVYF STGDRDNPRS TDAVDRLYGV KDTSPDQSVF ATLTENSLTN QTGVVSSSIL PLTTSGWYVR LIAAAGEKSL AAPVLFNKYV LFDTFLPNNA LCDIGGGAKV YAVSYLNGLY SRYSLGNGIP TEAVLVVRPT GTTAFVGAGG GVINLLNLIP DSPPTGGGGG GGDGSANQKP IQEIFNFVTG IIPISWREVF
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