| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0947 |
|---|
| Symbol | |
|---|
| ID | 3738517 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 1049893 |
|---|
| End bp | 1051230 |
|---|
| Gene Length | 1338 bp |
|---|
| Protein Length | 445 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637778226 |
|---|
| Product | peptidase U62, modulator of DNA gyrase |
|---|
| Protein accession | YP_383914 |
|---|
| Protein GI | 78222167 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.250758 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 82 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACAA ATGAAATGAT CGAAACCGTC GCCACCCTCC TGAAGGACCG TCCCCTGGAC
GGGTGGGAGG TTGCCGCCGC AACGTCGCGC CTACTCTCCA TCGAGGTGAA GGAGCAGAAG
GTGGACACCT TCAAGTGCTC CGCCCCGGGC GGGGTAAGCA TCCGGGTCCT GAAGAACGGC
GGCATGGGGT TCTCGTACTC CACCAGCATG GAGCCTGCCG ACCTTGCCCG CATGGTGGAA
AACGCCCTCG TGGGGGCCGG AGCCCAGACC CCCGATGAGC ACCATGCCTT TCCCGAGCCC
CGTCCCGGTT CGGAGATCCC CGGGCTCTAC GACGAGGGGC TGGCGGCCGT GCCCGAAGCG
GAGAAGGTGG CGCGGGCCAT GGAGCTGGAG CGGCTCGTCA TGGCTGCCGA CCCGCGGGTG
AAGCGGGTGC GCAAATGCTC CTTCGGCGAG TCGACGGTGG AGACCCGTAT CGTCAACTCC
CGTGGCGTCG ATGCCACCTG CCGGGGTACG TCGGTGTCGG CCAGCGTCTC GGCTATCGCC
GAGGAAAGCG GCAATTCCCA GATGGGGTGG GACTTCGACT TCGCCAACCA TTTCACCGAT
CTGTCCGTTG ACCGGATCGC GACACGGGCC GTGGCCAAGG CGGTGGGGCT TCTGGGGGCC
GCGAAGATCC CGACCATGCG CTGTCCGGCG GTTCTCGACA ACTACGTGGC CACCGAAATC
CTGGAGGTGC TCGCCTCCGC CTTCCTGGCC GAGAGCGTCC AGAAGGGGAA GTCGCTCCTG
GTGGGGAAAA AGGGAACCCG GATTGTCAGC CCCCTCCTCC GGATTCGGGA TGACGGGACC
CTCCCCGGCG GCATGGGGAC TGCCCCCTTC GATGCCGAGG GGGTGCCGAA GCAGAACACA
ATCCTCGTGG AGGACGGCGT GCTCCGTGGC TACCTCTACG ACACTCTCCG GGCCCGAAAA
GACGGTGTCG CTTCCACCGG CAATGCCAGC CGCGGCGGCA TCAAGTCCCC TCCCCACATG
GGAGTGTCCA ACCTCTTCAT CGAGAACGGC ACCGTCCCCT TCGATGACCT CATGGCCGGC
ATCGGGCGGG GGATCCTTCT CACCGACGTC ATGGGGATGC ACACCGCCAA TCCCATCTCC
GGCGACTTCT CCGTGGGGGC CGCCGGTTTC CTCATCGAAG AGGGGAAGGT GACGGTTCCG
GTCAAGGGAA TCGCCATCTC CGGGAATATT CTGGAACTCT TCCAGGGAGT GGAAGGGGTG
GGGAACGACC TTCGGCTTTA CGGCACCGTG GGGGCGCCGT CGCTGCGGAT CGCAGCCCTT
GATGTGAGCG GCGAGTAG
|
|---|
| Protein sequence | MNTNEMIETV ATLLKDRPLD GWEVAAATSR LLSIEVKEQK VDTFKCSAPG GVSIRVLKNG
GMGFSYSTSM EPADLARMVE NALVGAGAQT PDEHHAFPEP RPGSEIPGLY DEGLAAVPEA
EKVARAMELE RLVMAADPRV KRVRKCSFGE STVETRIVNS RGVDATCRGT SVSASVSAIA
EESGNSQMGW DFDFANHFTD LSVDRIATRA VAKAVGLLGA AKIPTMRCPA VLDNYVATEI
LEVLASAFLA ESVQKGKSLL VGKKGTRIVS PLLRIRDDGT LPGGMGTAPF DAEGVPKQNT
ILVEDGVLRG YLYDTLRARK DGVASTGNAS RGGIKSPPHM GVSNLFIENG TVPFDDLMAG
IGRGILLTDV MGMHTANPIS GDFSVGAAGF LIEEGKVTVP VKGIAISGNI LELFQGVEGV
GNDLRLYGTV GAPSLRIAAL DVSGE
|
|---|
| |