Gene Gmet_0885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_0885 
Symbol 
ID3738844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp974460 
End bp975392 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content62% 
IMG OID637778164 
Productglycosyl transferase family protein 
Protein accessionYP_383852 
Protein GI78222105 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.000000118125 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCAAGC CCTATATCTC CATCATCATC CCTGTCTACA ACGAGGAACC GAACCTCCAG 
AAACTCCTGG CGCGGCTCTA CCCGGTCATG ACCGCCCTCG GCAAGCCCTT CGAGATCATC
TTCACCGACG ACGGCTCCCG GGACCGCTCC CTGGAAATCC TCCGGGAGAT GGCCCAGAGC
CATCCGGAAG TGAAGGTGAT CGAGTTCAAC GGCAACTTCG GCCAGCACAT GGCAATCATG
GCAGCCTTCG AGATGAGCGC CGGCGAGATC GTCGTCACCC TCGACGCCGA CCTCCAGAAC
CCCCCGGAAG AGATCCCCAA GCTCGTGGCC GAGATGGAGA AGGGACACGA CGTGGTGGGA
AGCGTCCGCC AGAAGCGCCA GGACACCTTC TTCCGCCGGG CCGCGTCGCG GATCGTCAAC
ATCACCACCA ACAAGATGAC CGGGATGCAG ATGAGCGACT ACGGCTGCAT GCTCCGGGCC
TACAACCGCA CCGTCATCGA CAACCTGAAC CGCTGCCAGG AGATGACCAC CTTCATCCCG
GCCCTGGCTC AGACCTTCGC TTCGAACCCG TCGGAGGTGC CGGTCTCCCA CGCAGAGCGG
GCCGAGGGAG AAAGCAAGTA TTCCCTCTAC CGCCTCATCC GCCTCAACTT CGACCTCATG
ACCGGCTTTT CGGTGGTGCC GCTCCAGCTC TTCGCCCTTC TCGGCATCCT CACCTCGGTG
GCGTCGGTCC TCTTCGCCCT CTTCCTCCTC GTGCGCCGCT TCCTGATCGG CTCCGAAGTG
GAAGGGGTCT TCACCCTCTT CGCCATCCTC TTCTTCTTCG TCGGCATCAT CATCTTCGGC
ATCGGCCTTG TGGGGGAATA CGTGGGGAGG ATCTACCAGG AAGTGCGGCG CCGGCCGCGG
TATGTGGTCA GGAGGACCTA TGGCTTCGAG TAG
 
Protein sequence
MSKPYISIII PVYNEEPNLQ KLLARLYPVM TALGKPFEII FTDDGSRDRS LEILREMAQS 
HPEVKVIEFN GNFGQHMAIM AAFEMSAGEI VVTLDADLQN PPEEIPKLVA EMEKGHDVVG
SVRQKRQDTF FRRAASRIVN ITTNKMTGMQ MSDYGCMLRA YNRTVIDNLN RCQEMTTFIP
ALAQTFASNP SEVPVSHAER AEGESKYSLY RLIRLNFDLM TGFSVVPLQL FALLGILTSV
ASVLFALFLL VRRFLIGSEV EGVFTLFAIL FFFVGIIIFG IGLVGEYVGR IYQEVRRRPR
YVVRRTYGFE