Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_0884 |
Symbol | |
ID | 3738843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 973538 |
End bp | 974473 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637778163 |
Product | putative formyltransferase |
Protein accession | YP_383851 |
Protein GI | 78222104 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0223] Methionyl-tRNA formyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 0.686111 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.000000271321 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTTCGA GTAGTGGGAG AGGAACGAGA GTGGTCGTCT GCGCCTACCA CAACGTCGGC TTCCGCTGTC TGGAGGAACT GCTGAAGCAG GGAGCCGACG TGCGGCTGGT CTTCACCCAT GAGGACTCCC CCACGGAGGA GATCTGGTTC CAGTCGGTGC GGGAACTGGC GCAACGCCAC GGCATCCCGT ACCTGACCAG CGACATCAAC GAGCCGGCCA ACGTGGCGAA GGTGCGGGAG ATCGCCCCCG ACTTCCTCTT CTCCTTCTAC TACCGGAACA TGATCACACC AGAGGTGCTG GATATCCCCC GCAAAGGCGC CCTGAACCTC CACGGCTCCT ACCTCCCCAA GTACCGGGGA CGGGTGCCGG TCAACTGGGC AGTGATCAAC GGCGAAACCG AGACCGGCGC CACCCTCCAC CACATGGTGG AAAAGCCCGA CGCCGGCGAC ATCGTGGACC GGGAGAAGGT TCCCATTGCT TTCACCGACA CCTCCTTCGA TGTCTTCACC AAGGTGACCG ATGCGGCAGT GACGGTCATC TCCCGGAGCT ACCCGCTCCT GGTCGCGGGG ACCGCCCCCC GCATCCCCAT GAACCTGGTG GAGGGGAACT ACTGCGGCGG CCGGCGGCCG GCCGACGGGC TCATCGACTG GACGAAAAGC GCCGTGCAGA TCTACAACCT CATTCGCGGC GTCACCCACC CCTACCCGGG CGCCTTCACG TACCTGGACG GGAAGAAGAT CCTTGTCTGG AGCGCCCGGC CGCTTCCGGG AAGCGCAGAG CCAGGGGTGG TGGTCACGGA AGATCCCCTG GTCGTCGGAA CCGGCGAGGG GCTCCTGGAG ATCACCTCGT TACAGCTCGA AGGGGGAGAC GAGGTTGCGG CCGGAAGCTT TTCCGCCATC GTCCACCCCG CAGGGAAAAG GTTTGCAAAC CCATAG
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Protein sequence | MASSSGRGTR VVVCAYHNVG FRCLEELLKQ GADVRLVFTH EDSPTEEIWF QSVRELAQRH GIPYLTSDIN EPANVAKVRE IAPDFLFSFY YRNMITPEVL DIPRKGALNL HGSYLPKYRG RVPVNWAVIN GETETGATLH HMVEKPDAGD IVDREKVPIA FTDTSFDVFT KVTDAAVTVI SRSYPLLVAG TAPRIPMNLV EGNYCGGRRP ADGLIDWTKS AVQIYNLIRG VTHPYPGAFT YLDGKKILVW SARPLPGSAE PGVVVTEDPL VVGTGEGLLE ITSLQLEGGD EVAAGSFSAI VHPAGKRFAN P
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