Gene Gmet_0884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_0884 
Symbol 
ID3738843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp973538 
End bp974473 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content64% 
IMG OID637778163 
Productputative formyltransferase 
Protein accessionYP_383851 
Protein GI78222104 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.686111 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.000000271321 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTTCGA GTAGTGGGAG AGGAACGAGA GTGGTCGTCT GCGCCTACCA CAACGTCGGC 
TTCCGCTGTC TGGAGGAACT GCTGAAGCAG GGAGCCGACG TGCGGCTGGT CTTCACCCAT
GAGGACTCCC CCACGGAGGA GATCTGGTTC CAGTCGGTGC GGGAACTGGC GCAACGCCAC
GGCATCCCGT ACCTGACCAG CGACATCAAC GAGCCGGCCA ACGTGGCGAA GGTGCGGGAG
ATCGCCCCCG ACTTCCTCTT CTCCTTCTAC TACCGGAACA TGATCACACC AGAGGTGCTG
GATATCCCCC GCAAAGGCGC CCTGAACCTC CACGGCTCCT ACCTCCCCAA GTACCGGGGA
CGGGTGCCGG TCAACTGGGC AGTGATCAAC GGCGAAACCG AGACCGGCGC CACCCTCCAC
CACATGGTGG AAAAGCCCGA CGCCGGCGAC ATCGTGGACC GGGAGAAGGT TCCCATTGCT
TTCACCGACA CCTCCTTCGA TGTCTTCACC AAGGTGACCG ATGCGGCAGT GACGGTCATC
TCCCGGAGCT ACCCGCTCCT GGTCGCGGGG ACCGCCCCCC GCATCCCCAT GAACCTGGTG
GAGGGGAACT ACTGCGGCGG CCGGCGGCCG GCCGACGGGC TCATCGACTG GACGAAAAGC
GCCGTGCAGA TCTACAACCT CATTCGCGGC GTCACCCACC CCTACCCGGG CGCCTTCACG
TACCTGGACG GGAAGAAGAT CCTTGTCTGG AGCGCCCGGC CGCTTCCGGG AAGCGCAGAG
CCAGGGGTGG TGGTCACGGA AGATCCCCTG GTCGTCGGAA CCGGCGAGGG GCTCCTGGAG
ATCACCTCGT TACAGCTCGA AGGGGGAGAC GAGGTTGCGG CCGGAAGCTT TTCCGCCATC
GTCCACCCCG CAGGGAAAAG GTTTGCAAAC CCATAG
 
Protein sequence
MASSSGRGTR VVVCAYHNVG FRCLEELLKQ GADVRLVFTH EDSPTEEIWF QSVRELAQRH 
GIPYLTSDIN EPANVAKVRE IAPDFLFSFY YRNMITPEVL DIPRKGALNL HGSYLPKYRG
RVPVNWAVIN GETETGATLH HMVEKPDAGD IVDREKVPIA FTDTSFDVFT KVTDAAVTVI
SRSYPLLVAG TAPRIPMNLV EGNYCGGRRP ADGLIDWTKS AVQIYNLIRG VTHPYPGAFT
YLDGKKILVW SARPLPGSAE PGVVVTEDPL VVGTGEGLLE ITSLQLEGGD EVAAGSFSAI
VHPAGKRFAN P