| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0833 |
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| Symbol | |
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| ID | 3738287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 918513 |
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| End bp | 920366 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637778111 |
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| Product | Alpha amylase, catalytic region |
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| Protein accession | YP_383800 |
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| Protein GI | 78222053 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 0.72167 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGTAC CGCAATCGAT CACGGAACTG GATCTCAAGA ACCTCACGAA TCGCACGTTT
CACCCTTCGC CCGTGGCCTG GGAAGACCAG GTGCTCTACT TTCTCCTGCT CGACCGCTTT
TCCGACGGGA AGGAGACCGG ATACCGCGAC AACCGGGGGA GGCGGGTCGC GAAGGGGGAA
ACGCCCCTTT ACCAGCCAGG CGACGCGGGG AATGCCATCC GCACCGAGCC CGAGGCTGCC
GTCTGGCGCG AGTCGGGGAG CCGCTGGTGC GGCGGAACCC TGAAGGGGCT AGCCAGCAAG
ATGGGGTATC TCAAGCGCAT GGGAGTGACC GCCGTCTGGG TCAGCCCCCT CTTCAAGCAG
TGCTCCTTCG TCCCTACCTA CCACGGCTAC GGCATCCAGA ACTTCCTCGA GGTGGACCCC
CATTTCGGCA CCGCCGACGA CCTGCGGGAA CTGGTCCATG TTGCCCATGC CAACGGCATC
TACGTCATCC TCGACATCAT CCTGAACCAC GCCGGCAATA TCTTTGCCTA CGACCGGGGC
TATACCCCCT ATGACGGCTC CACCGTCTAC CCGGTGACGG GGTTTCGCTC CGCCGACGGC
ACGCCGAACC TCCCCTTCGG CCCCATCGAT ACCAAGGCCA ACCCCGATGC CTGGCCCGAT
GGCGCGGTCT GGCCCCGGGA GCTTCAGGCG GCCAACGCCT ATACCCGCAT GGGCCACATC
CGGGATTGGG ACAGCTACCA CGAATACCTG GACGGTGACT TCTTCGACCT GAAGGACATC
CACCTGGGTG AGGGCGAGGT TGATGCTTTC CGTCCGTCGC CGGCACTCCT GGCCCTCTGC
GAGGTTTACA AGTACTGGAT TGCCCTCTCC GATGTGGACG GATACCGCAT CGACACGGTG
AAGCACATGG GTGCCGGGGC CACCCGGTTT TTCGCCTCGG TGATCCACGA GTTCGCCCAG
GCCATCGGCA AGGAGAACTT TTACCTCATC GGCGAGATCA CCGGCGGCCG CGACAATGCC
TTCAACACCC TGGCGACCAC CGGCCTCAAC GCGGCACTCG GCGTGGACGA CATTCCGCTG
CGCCTTGAGG ACCTGGTGAA AGGGAGGGCA AACCCCGCCG ACTACTTCAA CCTCTTCCGC
AACTCCCTCC TGGTGCGGAA GGAGTCCCAC GTCTGGTTCC GGGACAAGGT GGTGACGGTC
ATCGACGACC ACGACCAGGT CTGTCGGGGG GCCAAGAAGG AGCGTTTCTG CGCCGGCGAT
CCCAAGTGGC GCCGGCTCGT GCTGAACGCC CTGGCCCTGA ACACGACCAC CCTCGGCATC
CCCTGCGTCT ACTATGGCAC CGAGCAGGCC TTTGACGGCG AGGGGGGCGA TGACCGGTAT
CTGCGCGAGT GCATGTTCGG CGGTCCTTTC GGCGCGTTCA GAACCCGGGG CGTCCAATTT
TTTGACGAGG AAAACCCGGT CTACCGCGAG TTCGCGAAGA TTCTCGCCCT GCGCCGGGAG
AAGCTCCCCC TGCGGCGCGG GCGCCAGTAT CTGCGGGAGA TCTCGGGGGA CGGGGTCACT
TTCGGGCTTC CCTATGTCAT CGGGGGCGAG ATTCGCTCGG TGGTCCCCTG GTCCCGCATC
TTTGACACCG AAGAGATGGT TCTTGCCATC AACACCGATG CCGACTCCCC CCGCACCGCC
TGGGTGCTGG TTGACGGGAG CCTCCACCGG GAGGGTGACC GCTTCGCCTA CCGCTACTCC
ACCGATCCGG GGCAGGTACG CGGAACAACC GCTGTCCAGC GGATCAACGA TGCCGTTCAG
GCGATACAGG TGACGGTTCC CGCAGCCGGT TTCGTGATGC TTGAACAGCG ATGA
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| Protein sequence | MTVPQSITEL DLKNLTNRTF HPSPVAWEDQ VLYFLLLDRF SDGKETGYRD NRGRRVAKGE
TPLYQPGDAG NAIRTEPEAA VWRESGSRWC GGTLKGLASK MGYLKRMGVT AVWVSPLFKQ
CSFVPTYHGY GIQNFLEVDP HFGTADDLRE LVHVAHANGI YVILDIILNH AGNIFAYDRG
YTPYDGSTVY PVTGFRSADG TPNLPFGPID TKANPDAWPD GAVWPRELQA ANAYTRMGHI
RDWDSYHEYL DGDFFDLKDI HLGEGEVDAF RPSPALLALC EVYKYWIALS DVDGYRIDTV
KHMGAGATRF FASVIHEFAQ AIGKENFYLI GEITGGRDNA FNTLATTGLN AALGVDDIPL
RLEDLVKGRA NPADYFNLFR NSLLVRKESH VWFRDKVVTV IDDHDQVCRG AKKERFCAGD
PKWRRLVLNA LALNTTTLGI PCVYYGTEQA FDGEGGDDRY LRECMFGGPF GAFRTRGVQF
FDEENPVYRE FAKILALRRE KLPLRRGRQY LREISGDGVT FGLPYVIGGE IRSVVPWSRI
FDTEEMVLAI NTDADSPRTA WVLVDGSLHR EGDRFAYRYS TDPGQVRGTT AVQRINDAVQ
AIQVTVPAAG FVMLEQR
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